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General Information
Title Inacc No : InaCC B1281, Scientific Name: Pseudomonas sp.
Organism Pseudomonas sp.
Sample Type Microbe
Description
External Links
Description URL
None

Sample Information
Sample Attribute
Sample Name InaCC B1281
Sample Title Inacc No : InaCC B1281, Scientific Name: Pseudomonas sp.
Description
Taxonomy ID 306
Bioproject Id
Locus Tag Prefix
Strain Pseudomonas sp. KR26.2
Isolate
Isolation Source Brugulera gymnorhiza (root)
Host
Lab Host
Biomaterial Provider
Sample Type cell culture
Collection Date N/A
Geographic Location Name Indonesia:Pantai Ketam, Ds. Pongkar, Kec. Tebing, Kab. Karimun, Kep. Riau
Latitude Longitude
Environmental Biome
Depth
Altitude
Collected By
Culture Collection Indonesian Culture Collection (InaCC) B1281
Genotype
Host Tissue Sampled
Identified By
Mating Type
Passage History
Sample Size
Serotype
Serovar
Specimen Voucher
Temperature 30
Organism 240
Growth Media Nutrient Agar (NA)
Center Direktorat Pengelolaan Laboratorium, Fasilitas Riset, dan Kawasan Sains dan Teknologi
Lab Pusat Sekuensing
Submitter Lab Pusat Sekuensing - BRIN
Submitted at 27-09-2024
Published at 30-09-2024

Other Information

  • Key: 4872319632
  • DatasetKey: 50c9509d-22c7-4a22-a47d-8c48425ef4a7
  • PublishingOrgKey: 28eb1a3f-1c15-4a95-931a-4af90ecb574d
  • InstallationKey: 997448a8-f762-11e1-a439-00145eb45e9a
  • HostingOrganizationKey: 28eb1a3f-1c15-4a95-931a-4af90ecb574d
  • PublishingCountry: US
  • Protocol: DWC_ARCHIVE
  • LastCrawled: 2024-10-18T20:49:13.203+00:00
  • LastParsed: 2024-10-19T13:26:48.753+00:00
  • CrawlId: 492
  • Extensions:
    • Http://rs.gbif.org/terms/1.0/Multimedia:
      • 0:
        • Http://purl.org/dc/terms/references: https://www.inaturalist.org/photos/362090760
        • Http://purl.org/dc/terms/creator: Anne Parsons
        • Http://purl.org/dc/terms/created: 2024-03-31T09:55:03-07:00
        • Http://rs.tdwg.org/dwc/terms/catalogNumber: 362090760
        • Http://purl.org/dc/terms/rightsHolder: Anne Parsons
        • Http://purl.org/dc/terms/publisher: iNaturalist
        • Http://purl.org/dc/terms/license: http://creativecommons.org/licenses/by-nc/4.0/
        • Http://purl.org/dc/terms/format: image/jpeg
        • Http://purl.org/dc/terms/identifier: https://inaturalist-open-data.s3.amazonaws.com/photos/362090760/original.jpeg
        • Http://purl.org/dc/terms/type: StillImage
      • 1:
        • Http://purl.org/dc/terms/references: https://www.inaturalist.org/photos/362090797
        • Http://purl.org/dc/terms/creator: Anne Parsons
        • Http://purl.org/dc/terms/created: 2024-03-31T09:54:55-07:00
        • Http://rs.tdwg.org/dwc/terms/catalogNumber: 362090797
        • Http://purl.org/dc/terms/rightsHolder: Anne Parsons
        • Http://purl.org/dc/terms/publisher: iNaturalist
        • Http://purl.org/dc/terms/license: http://creativecommons.org/licenses/by-nc/4.0/
        • Http://purl.org/dc/terms/format: image/jpeg
        • Http://purl.org/dc/terms/identifier: https://inaturalist-open-data.s3.amazonaws.com/photos/362090797/original.jpeg
        • Http://purl.org/dc/terms/type: StillImage
  • BasisOfRecord: HUMAN_OBSERVATION
  • OccurrenceStatus: PRESENT
  • TaxonKey: 3223236
  • KingdomKey: 3
  • PhylumKey: 111
  • ClassKey: 362
  • OrderKey: 1474
  • FamilyKey: 5607
  • GenusKey: 3219881
  • SpeciesKey: 3223236
  • AcceptedTaxonKey: 3223236
  • ScientificName: Pseudomonas syringae van Hall, 1902
  • AcceptedScientificName: Pseudomonas syringae van Hall, 1902
  • Kingdom: Bacteria
  • Phylum: Proteobacteria
  • Order: Pseudomonadales
  • Family: Pseudomonadaceae
  • Genus: Pseudomonas
  • Species: Pseudomonas syringae
  • GenericName: Pseudomonas
  • SpecificEpithet: syringae
  • TaxonRank: SPECIES
  • TaxonomicStatus: ACCEPTED
  • IucnRedListCategory: NE
  • DateIdentified: 2024-05-22T15:39:28
  • DecimalLatitude: 37.459545
  • DecimalLongitude: -121.868967
  • Continent: NORTH_AMERICA
  • StateProvince: California
  • Gadm:
    • Level0:
      • Gid: USA
      • Name: United States
    • Level1:
      • Gid: USA.5_1
      • Name: California
    • Level2:
      • Gid: USA.5.43_1
      • Name: Santa Clara
  • Year: 2024
  • Month: 3
  • Day: 31
  • EventDate: 2024-03-31T09:54
  • StartDayOfYear: 91
  • EndDayOfYear: 91
  • Issues:
    • 0: COORDINATE_ROUNDED
    • 1: CONTINENT_DERIVED_FROM_COORDINATES
    • 2: TAXON_MATCH_TAXON_ID_IGNORED
  • Modified: 2024-05-25T02:15:30.000+00:00
  • LastInterpreted: 2024-10-19T13:26:48.753+00:00
  • References: https://www.inaturalist.org/observations/217507486
  • License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
  • IsSequenced: False
  • Identifiers:
    • 0:
      • Identifier: 217507486
  • Media:
    • 0:
      • Type: StillImage
      • Format: image/jpeg
      • References: https://www.inaturalist.org/photos/362090797
      • Created: 2024-03-31T16:54:55.000+00:00
      • Creator: Anne Parsons
      • Publisher: iNaturalist
      • License: http://creativecommons.org/licenses/by-nc/4.0/
      • RightsHolder: Anne Parsons
      • Identifier: https://inaturalist-open-data.s3.amazonaws.com/photos/362090797/original.jpeg
    • 1:
      • Type: StillImage
      • Format: image/jpeg
      • References: https://www.inaturalist.org/photos/362090760
      • Created: 2024-03-31T16:55:03.000+00:00
      • Creator: Anne Parsons
      • Publisher: iNaturalist
      • License: http://creativecommons.org/licenses/by-nc/4.0/
      • RightsHolder: Anne Parsons
      • Identifier: https://inaturalist-open-data.s3.amazonaws.com/photos/362090760/original.jpeg
  • Facts:
  • Relations:
  • IsInCluster: False
  • DatasetName: iNaturalist research-grade observations
  • RecordedBy: Anne Parsons
  • IdentifiedBy: Anne Parsons
  • GeodeticDatum: WGS84
  • Class: Gammaproteobacteria
  • CountryCode: US
  • RecordedByIDs:
  • IdentifiedByIDs:
  • Country: United States of America
  • GbifRegion: NORTH_AMERICA
  • PublishedByGbifRegion: NORTH_AMERICA
  • RightsHolder: Anne Parsons
  • Identifier: 217507486
  • Http://unknown.org/nick: truthseqr
  • VerbatimEventDate: 2024/03/31 9:54 AM
  • VerbatimLocality: Ed R. Levin County Park, CA, USA
  • CollectionCode: Observations
  • GbifID: 4872319632
  • OccurrenceID: https://www.inaturalist.org/observations/217507486
  • TaxonID: 337405
  • CatalogNumber: 217507486
  • InstitutionCode: iNaturalist
  • EventTime: 09:54:00-07:00
  • OccurrenceRemarks: Whitened vetch leaves.
  • Http://unknown.org/captive: wild
  • IdentificationID: 490625032

  • Culture temp:
    • @ref: 67770
    • Growth: positive
    • Type: growth
    • Temperature: 30

  • Isolation:
    • @ref: 67770
    • Sample type: Soil near an oil refinery in Tokyo
    • Country: Japan
    • Origin.country: JPN
    • Continent: Asia

  • 16S sequences:
    • @ref: 67770
    • Description: Pseudomonas sp. DNA for 16S rRNA, partial sequence
    • Accession: D87103
    • Length: 887
    • Database: nuccore
    • NCBI tax ID: 306

  • Lineage: cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; unclassified Pseudomonas
  • LineageEx:
    • Taxon:
      • 0:
        • TaxId: 131567
        • ScientificName: cellular organisms
        • Rank: no rank
      • 1:
        • TaxId: 2
        • ScientificName: Bacteria
        • Rank: superkingdom
      • 2:
        • TaxId: 1224
        • ScientificName: Pseudomonadota
        • Rank: phylum
      • 3:
        • TaxId: 1236
        • ScientificName: Gammaproteobacteria
        • Rank: class
      • 4:
        • TaxId: 72274
        • ScientificName: Pseudomonadales
        • Rank: order
      • 5:
        • TaxId: 135621
        • ScientificName: Pseudomonadaceae
        • Rank: family
      • 6:
        • TaxId: 286
        • ScientificName: Pseudomonas
        • Rank: genus
      • 7:
        • TaxId: 196821
        • ScientificName: unclassified Pseudomonas
        • Rank: no rank