General Information

Title Inacc No : InaCC B24, Scientific Name: Klebsiella pasteurii
Organism Klebsiella pasteurii
Sample Type Microbe
Description
External Links
Description URL
None

Sample Information

Sample Attribute
Sample Name InaCC B24
Sample Title Inacc No : InaCC B24, Scientific Name: Klebsiella pasteurii
Description
Taxonomy ID 2587529
Bioproject Id
Locus Tag Prefix
Strain Klebsiella pasteurii 075LWA
Isolate
Isolation Source Leaf
Host
Lab Host
Biomaterial Provider
Sample Type cell culture
Collection Date N/A
Geographic Location Name Indonesia:South East Sulawesi, Protected Forest Mekongga, Tinukari, North Kolaka
Latitude Longitude
Environmental Biome
Depth
Altitude
Collected By Agustinus Joko N
Culture Collection Indonesian Culture Collection (InaCC) B24
Genotype
Host Tissue Sampled
Identified By
Mating Type
Passage History
Sample Size
Serotype
Serovar
Specimen Voucher
Temperature 30
Organism 3137
Growth Media NA/TSA
Center Direktorat Pengelolaan Laboratorium, Fasilitas Riset, dan Kawasan SainsĀ danĀ Teknologi
Lab Pusat Sekuensing
Submitter Lab Pusat Sekuensing - BRIN
Submitted at 26-09-2024
Published at 02-10-2024

Other Information

  • Key: 4152792858
  • DatasetKey: d8cd16ba-bb74-4420-821e-083f2bac17c2
  • PublishingOrgKey: ada9d123-ddb4-467d-8891-806ea8d94230
  • InstallationKey: 17a83780-3060-4851-9d6f-029d5fcb81c9
  • HostingOrganizationKey: fbca90e3-8aed-48b1-84e3-369afbd000ce
  • PublishingCountry: GB
  • Protocol: EML
  • LastCrawled: 2024-10-19T12:05:58.350+00:00
  • LastParsed: 2024-10-19T12:53:07.400+00:00
  • CrawlId: 189
  • Extensions:
  • BasisOfRecord: MATERIAL_SAMPLE
  • OccurrenceStatus: PRESENT
  • TaxonKey: 12165548
  • KingdomKey: 3
  • PhylumKey: 111
  • ClassKey: 362
  • OrderKey: 10801383
  • FamilyKey: 4899
  • GenusKey: 3221867
  • SpeciesKey: 11145273
  • AcceptedTaxonKey: 11145273
  • ScientificName: Klebsiella pasteurii
  • AcceptedScientificName: Klebsiella grimontii Passet & Brisse, 2018
  • Kingdom: Bacteria
  • Phylum: Proteobacteria
  • Order: Enterobacterales
  • Family: Enterobacteriaceae
  • Genus: Klebsiella
  • Species: Klebsiella grimontii
  • GenericName: Klebsiella
  • SpecificEpithet: pasteurii
  • TaxonRank: SPECIES
  • TaxonomicStatus: SYNONYM
  • IucnRedListCategory: NE
  • Continent: ASIA
  • Gadm:
  • Year: 2022
  • Month: 3
  • Day: 6
  • EventDate: 2022-03-06
  • StartDayOfYear: 65
  • EndDayOfYear: 65
  • Issues:
    • 0: CONTINENT_DERIVED_FROM_COUNTRY
    • 1: TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED
    • 2: TAXON_MATCH_TAXON_ID_IGNORED
  • LastInterpreted: 2024-10-19T12:53:07.400+00:00
  • References: https://www.ebi.ac.uk/ena/browser/view/OQ654041
  • License: http://creativecommons.org/licenses/by/4.0/legalcode
  • IsSequenced: True
  • AssociatedSequences: https://www.ebi.ac.uk/ena/browser/api/embl/OQ654041
  • Identifiers:
    • 0:
      • Identifier: OQ654041
  • Media:
  • Facts:
  • Relations:
  • IsInCluster: False
  • Class: Gammaproteobacteria
  • CountryCode: CN
  • RecordedByIDs:
  • IdentifiedByIDs:
  • Country: China
  • GbifRegion: ASIA
  • PublishedByGbifRegion: EUROPE
  • Identifier: OQ654041
  • TaxonConceptID: https://www.ebi.ac.uk/ena/browser/view/Taxon:2587529
  • OccurrenceRemarks: Klebsiella pasteurii strain CM-1 16S ribosomal RNA gene, partial sequence.
  • GbifID: 4152792858
  • OccurrenceID: OQ654041
  • TaxonID: ASV:3349423916130dd56e6eeba01fbbc92f

  • Cell morphology:
    • @ref: 121622
    • Gram stain: negative
    • Cell shape: rod-shaped
    • Motility: no

  • Culture medium:
    • @ref: 121622
    • Name: CIP Medium 72
    • Growth: yes
    • Link: https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

  • Isolation:
    • @ref: 121622
    • Sample type: Human, Carriage
    • Geographic location: Pavia
    • Country: Italy
    • Origin.country: ITA
    • Continent: Europe
    • Isolation date: 2017-12-01
  • Taxonmaps:
    • @ref: 69479
    • File name: preview.99_117.png
    • Url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_6;96_7;97_7;98_17;99_117&stattab=map
    • Last taxonomy: Enterobacteriaceae
    • 16S sequence: MN091366
    • Sequence Identity: None
    • Total samples: 4010
    • Soil counts: 121
    • Aquatic counts: 233
    • Animal counts: 3440
    • Plant counts: 216

  • Risk assessment:
    • @ref: 121622
    • Biosafety level: 2
    • Biosafety level comment: Risk group (French classification)

  • 16S sequences:
    • @ref: 20215
    • Description: Klebsiella pasteurii strain SPARK836C1 16S ribosomal RNA gene, partial sequence
    • Accession: MN091366
    • Length: 1550
    • Database: nuccore
    • NCBI tax ID: 2587529
  • Genome sequences:
    • @ref: 66792
    • Description: Klebsiella pasteurii SB6412
    • Accession: GCA_902158725
    • Assembly level: scaffold
    • Database: ncbi
    • NCBI tax ID: 2587529

  • Lineage: cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella
  • LineageEx:
    • Taxon:
      • 0:
        • TaxId: 131567
        • ScientificName: cellular organisms
        • Rank: no rank
      • 1:
        • TaxId: 2
        • ScientificName: Bacteria
        • Rank: superkingdom
      • 2:
        • TaxId: 1224
        • ScientificName: Pseudomonadota
        • Rank: phylum
      • 3:
        • TaxId: 1236
        • ScientificName: Gammaproteobacteria
        • Rank: class
      • 4:
        • TaxId: 91347
        • ScientificName: Enterobacterales
        • Rank: order
      • 5:
        • TaxId: 543
        • ScientificName: Enterobacteriaceae
        • Rank: family
      • 6:
        • TaxId: 2890311
        • ScientificName: Klebsiella/Raoultella group
        • Rank: no rank
      • 7:
        • TaxId: 570
        • ScientificName: Klebsiella
        • Rank: genus