General Information

Title Inacc No : InaCC B1554, Scientific Name: Stenotrophamonas maltophilia
Organism Stenotrophomonas maltophilia
Sample Type Microbe
Description
External Links
Description URL
None

Sample Information

Sample Attribute
Sample Name InaCC B1554
Sample Title Inacc No : InaCC B1554, Scientific Name: Stenotrophamonas maltophilia
Description
Taxonomy ID 40324
Bioproject Id
Locus Tag Prefix
Strain Stenotrophamonas maltophilia ZLO2.2
Isolate
Isolation Source Rhizome of bitter ginger (Zingiber zerumbet)
Host
Lab Host
Biomaterial Provider
Sample Type cell culture
Collection Date N/A
Geographic Location Name Indonesia: West Nusa Tenggara, Kolohbera Village, Pemenang Subregency, West Lombok Regency
Latitude Longitude
Environmental Biome
Depth
Altitude
Collected By Tri Ratna S
Culture Collection Indonesian Culture Collection (InaCC) B1554
Genotype
Host Tissue Sampled
Identified By
Mating Type
Passage History
Sample Size
Serotype
Serovar
Specimen Voucher
Temperature 30
Organism 3102
Growth Media Nutrient Agar (NA)
Center Direktorat Pengelolaan Laboratorium, Fasilitas Riset, dan Kawasan Sains dan Teknologi
Lab Pusat Sekuensing
Submitter Lab Pusat Sekuensing - BRIN
Submitted at 26-09-2024
Published at 02-10-2024

Other Information

  • Key: 4152826173
  • DatasetKey: d8cd16ba-bb74-4420-821e-083f2bac17c2
  • PublishingOrgKey: ada9d123-ddb4-467d-8891-806ea8d94230
  • InstallationKey: 17a83780-3060-4851-9d6f-029d5fcb81c9
  • HostingOrganizationKey: fbca90e3-8aed-48b1-84e3-369afbd000ce
  • PublishingCountry: GB
  • Protocol: EML
  • LastCrawled: 2024-10-19T12:05:58.350+00:00
  • LastParsed: 2024-10-19T12:53:07.734+00:00
  • CrawlId: 189
  • Extensions:
  • BasisOfRecord: MATERIAL_SAMPLE
  • OccurrenceStatus: PRESENT
  • TaxonKey: 11055715
  • KingdomKey: 3
  • PhylumKey: 111
  • ClassKey: 362
  • OrderKey: 820
  • FamilyKey: 5611
  • GenusKey: 3222368
  • SpeciesKey: 11055715
  • AcceptedTaxonKey: 11055715
  • ScientificName: Stenotrophomonas maltophilia_B
  • AcceptedScientificName: Stenotrophomonas maltophilia_B
  • Kingdom: Bacteria
  • Phylum: Proteobacteria
  • Order: Xanthomonadales
  • Family: Xanthomonadaceae
  • Genus: Stenotrophomonas
  • Species: Stenotrophomonas maltophilia
  • GenericName: Stenotrophomonas
  • SpecificEpithet: maltophilia
  • TaxonRank: SPECIES
  • TaxonomicStatus: ACCEPTED
  • Continent: ASIA
  • Gadm:
  • Year: 2023
  • Month: 1
  • Day: 22
  • EventDate: 2023-01-22
  • StartDayOfYear: 22
  • EndDayOfYear: 22
  • Issues:
    • 0: CONTINENT_DERIVED_FROM_COUNTRY
    • 1: TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED
    • 2: TAXON_MATCH_TAXON_ID_IGNORED
  • LastInterpreted: 2024-10-19T12:53:07.734+00:00
  • References: https://www.ebi.ac.uk/ena/browser/view/OQ875242
  • License: http://creativecommons.org/licenses/by/4.0/legalcode
  • IsSequenced: True
  • AssociatedSequences: https://www.ebi.ac.uk/ena/browser/api/embl/OQ875242
  • Identifiers:
    • 0:
      • Identifier: OQ875242
  • Media:
  • Facts:
  • Relations:
  • IsInCluster: False
  • Class: Gammaproteobacteria
  • CountryCode: IN
  • RecordedByIDs:
  • IdentifiedByIDs:
  • Country: India
  • GbifRegion: ASIA
  • PublishedByGbifRegion: EUROPE
  • Identifier: OQ875242
  • TaxonConceptID: https://www.ebi.ac.uk/ena/browser/view/Taxon:40324
  • OccurrenceRemarks: Stenotrophomonas maltophilia strain V8 16S ribosomal RNA gene, partial sequence.
  • GbifID: 4152826173
  • OccurrenceID: OQ875242
  • TaxonID: ASV:d99db700bf451a33c6d9fda230470179

  • Cell morphology:
    • 0:
      • @ref: 22951
      • Gram stain: negative
      • Cell length: 1.5 µm
      • Cell width: 0.5 µm
      • Cell shape: rod-shaped
      • Flagellum arrangement: polar
    • 1:
      • @ref: 120771
      • Gram stain: negative
      • Cell shape: rod-shaped
      • Motility: yes
  • Colony morphology:
    • @ref: 22947
    • Type of hemolysis: beta
    • Hemolysis ability: 1
  • Pigmentation:
    • @ref: 120771
    • Production: no
    • Name: Pyocyanin

  • Culture medium:
    • 0:
      • @ref: 40685
      • Name: MEDIUM 72- for trypto casein soja agar
      • Growth: yes
      • Composition: Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
    • 1:
      • @ref: 12669
      • Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
      • Growth: yes
      • Link: https://mediadive.dsmz.de/medium/92
      • Composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
    • 2:
      • @ref: 12669
      • Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)
      • Growth: yes
      • Link: https://mediadive.dsmz.de/medium/693
      • Composition: Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
    • 3:
      • @ref: 120771
      • Name: CIP Medium 72
      • Growth: yes
      • Link: https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72
  • Culture temp:
    • 0:
      • @ref: 12669
      • Growth: positive
      • Type: growth
      • Temperature: 30
    • 1:
      • @ref: 22947
      • Growth: positive
      • Type: growth
      • Temperature: 42
    • 2:
      • @ref: 22951
      • Growth: positive
      • Type: growth
      • Temperature: 35
    • 3:
      • @ref: 40685
      • Growth: positive
      • Type: growth
      • Temperature: 30
    • 4:
      • @ref: 44868
      • Growth: positive
      • Type: growth
      • Temperature: 37
    • 5:
      • @ref: 67770
      • Growth: positive
      • Type: growth
      • Temperature: 30
    • 6:
      • @ref: 120771
      • Growth: positive
      • Type: growth
      • Temperature: 25-41
    • 7:
      • @ref: 120771
      • Growth: no
      • Type: growth
      • Temperature: 5
    • 8:
      • @ref: 120771
      • Growth: no
      • Type: growth
      • Temperature: 10

  • Oxygen tolerance:
    • 0:
      • @ref: 44868
      • Oxygen tolerance: aerobe
    • 1:
      • @ref: 120771
      • Oxygen tolerance: obligate aerobe
  • Antibiogram:
    • 0:
      • @ref: 12669
      • Medium: Mueller-Hinton Agar
      • Penicillin G: 0
      • Oxacillin: 0
      • Ampicillin: 0
      • Ticarcillin: 22
      • Mezlocillin: 20-22
      • Cefalotin: 0
      • Cefazolin: 0
      • Cefotaxime: 16
      • Aztreonam: 0
      • Imipenem: 10
      • Tetracycline: 28
      • Chloramphenicol: 34
      • Gentamycin: 24
      • Amikacin: 26
      • Vancomycin: 6
      • Erythromycin: 14
      • Lincomycin: 0
      • Ofloxacin: 32-34
      • Norfloxacin: 26
      • Colistin: 12
      • Pipemidic acid: 22
      • Nitrofurantoin: 0
      • Bacitracin: 12
      • Polymyxin b: 14
      • Kanamycin: 40-42
      • Neomycin: 22
      • Doxycycline: 30
      • Ceftriaxone: 12
      • Clindamycin: 0
      • Fosfomycin: 18
      • Moxifloxacin: 40
      • Linezolid: 0
      • Nystatin: 0
      • Quinupristin/dalfopristin: 10
      • Teicoplanin: 8
      • Piperacillin/tazobactam: 22-24
    • 1:
      • @ref: 12669
      • Medium: Mueller-Hinton Agar
      • Incubation temperature: 37
      • Penicillin G: 0
      • Oxacillin: 0
      • Ampicillin: 0
      • Ticarcillin: 0
      • Mezlocillin: 18
      • Cefalotin: 0
      • Cefazolin: 0
      • Cefotaxime: 8
      • Aztreonam: n.d.
      • Imipenem: 6
      • Tetracycline: 16-18
      • Chloramphenicol: 26-28
      • Gentamycin: 20
      • Amikacin: 22-24
      • Vancomycin: 8
      • Erythromycin: 14-16
      • Lincomycin: 6
      • Ofloxacin: 20-22
      • Norfloxacin: 18
      • Colistin: 10
      • Pipemidic acid: 14
      • Nitrofurantoin: 0
      • Bacitracin: 14
      • Polymyxin b: 14
      • Kanamycin: 22-24
      • Neomycin: 20
      • Doxycycline: 18
      • Ceftriaxone: n.d.
      • Clindamycin: n.d.
      • Fosfomycin: n.d.
      • Moxifloxacin: n.d.
      • Linezolid: n.d.
      • Nystatin: n.d.
      • Quinupristin/dalfopristin: n.d.
      • Teicoplanin: n.d.
      • Piperacillin/tazobactam: n.d.
    • 2:
      • @ref: 12669
      • Medium: Mueller Hinton
      • Incubation temperature: 30
      • Oxygen condition: aerob
      • Penicillin G: 0
      • Oxacillin: 0
      • Ampicillin: 0
      • Ticarcillin: 20
      • Mezlocillin: 20
      • Cefalotin: 0
      • Cefazolin: 0
      • Cefotaxime: 14
      • Aztreonam: 0
      • Imipenem: 8-10
      • Tetracycline: 26-28
      • Chloramphenicol: 32-34
      • Gentamycin: 26
      • Amikacin: 28
      • Vancomycin: 0
      • Erythromycin: 14
      • Lincomycin: 0
      • Ofloxacin: 34
      • Norfloxacin: 28
      • Colistin: 14
      • Pipemidic acid: 20-22
      • Nitrofurantoin: 0
      • Bacitracin: 12
      • Polymyxin b: 16
      • Kanamycin: 30
      • Neomycin: 24
      • Doxycycline: 30
      • Ceftriaxone: 10
      • Clindamycin: 6
      • Fosfomycin: 14
      • Moxifloxacin: 44
      • Linezolid: 6-8
      • Nystatin: 0
      • Quinupristin/dalfopristin: 8
      • Teicoplanin: 6-8
      • Piperacillin/tazobactam: 22
  • Halophily:
    • 0:
      • @ref: 22947
      • Salt: NaCl
      • Growth: positive
      • Tested relation: growth
      • Concentration: 4.5 %(w/v)
    • 1:
      • @ref: 120771
      • Salt: NaCl
      • Growth: positive
      • Tested relation: growth
      • Concentration: 0-2 %
    • 2:
      • @ref: 120771
      • Salt: NaCl
      • Growth: no
      • Tested relation: growth
      • Concentration: 4 %
    • 3:
      • @ref: 120771
      • Salt: NaCl
      • Growth: no
      • Tested relation: growth
      • Concentration: 6 %
    • 4:
      • @ref: 120771
      • Salt: NaCl
      • Growth: no
      • Tested relation: growth
      • Concentration: 8 %
    • 5:
      • @ref: 120771
      • Salt: NaCl
      • Growth: no
      • Tested relation: growth
      • Concentration: 10 %
  • Observation:
    • @ref: 67770
    • Observation: quinones: Q-8
  • Metabolite utilization:
    • 0:
      • @ref: 22947
      • Chebi-ID: 16947
      • Metabolite: citrate
      • Utilization activity: +
      • Kind of utilization tested: growth
    • 1:
      • @ref: 22947
      • Chebi-ID: 15824
      • Metabolite: D-fructose
      • Utilization activity: +
      • Kind of utilization tested: growth
    • 2:
      • @ref: 22947
      • Chebi-ID: 16024
      • Metabolite: D-mannose
      • Utilization activity: -
      • Kind of utilization tested: growth
    • 3:
      • @ref: 22947
      • Chebi-ID: 65327
      • Metabolite: D-xylose
      • Utilization activity: -
      • Kind of utilization tested: growth
    • 4:
      • @ref: 22947
      • Chebi-ID: 24996
      • Metabolite: lactate
      • Utilization activity: -
      • Kind of utilization tested: growth
    • 5:
      • @ref: 22947
      • Chebi-ID: 5291
      • Metabolite: gelatin
      • Utilization activity: +
      • Kind of utilization tested: hydrolysis
    • 6:
      • @ref: 22947
      • Chebi-ID: 17234
      • Metabolite: glucose
      • Utilization activity: -
      • Kind of utilization tested: growth
    • 7:
      • @ref: 22947
      • Chebi-ID: 15589
      • Metabolite: L-malate
      • Utilization activity: +
      • Kind of utilization tested: growth
    • 8:
      • @ref: 22947
      • Chebi-ID: 17306
      • Metabolite: maltose
      • Utilization activity: +
      • Kind of utilization tested: growth
    • 9:
      • @ref: 22947
      • Chebi-ID: 17992
      • Metabolite: sucrose
      • Utilization activity: +
      • Kind of utilization tested: growth
    • 10:
      • @ref: 22947
      • Chebi-ID: 53426
      • Metabolite: tween 80
      • Utilization activity: +
      • Kind of utilization tested: hydrolysis
    • 11:
      • @ref: 22947
      • Chebi-ID: 17632
      • Metabolite: nitrate
      • Utilization activity: +
      • Kind of utilization tested: reduction
    • 12:
      • @ref: 22951
      • Chebi-ID: 17306
      • Metabolite: maltose
      • Utilization activity: +
      • Kind of utilization tested: growth
    • 13:
      • @ref: 22951
      • Chebi-ID: 17716
      • Metabolite: lactose
      • Utilization activity: +/-
      • Kind of utilization tested: growth
    • 14:
      • @ref: 22951
      • Chebi-ID: 27082
      • Metabolite: trehalose
      • Utilization activity: +
      • Kind of utilization tested: growth
    • 15:
      • @ref: 22951
      • Chebi-ID: 17057
      • Metabolite: cellobiose
      • Utilization activity: +
      • Kind of utilization tested: growth
    • 16:
      • @ref: 22951
      • Chebi-ID: 17814
      • Metabolite: salicin
      • Utilization activity: +
      • Kind of utilization tested: growth
    • 17:
      • @ref: 68371
      • Metabolite: Potassium 5-ketogluconate
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 18:
      • @ref: 68371
      • Metabolite: Potassium 2-ketogluconate
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 19:
      • @ref: 68371
      • Chebi-ID: 24265
      • Metabolite: gluconate
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 20:
      • @ref: 68371
      • Chebi-ID: 18403
      • Metabolite: L-arabitol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 21:
      • @ref: 68371
      • Chebi-ID: 18333
      • Metabolite: D-arabitol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 22:
      • @ref: 68371
      • Chebi-ID: 18287
      • Metabolite: L-fucose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 23:
      • @ref: 68371
      • Chebi-ID: 28847
      • Metabolite: D-fucose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 24:
      • @ref: 68371
      • Chebi-ID: 16443
      • Metabolite: D-tagatose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 25:
      • @ref: 68371
      • Chebi-ID: 62318
      • Metabolite: D-lyxose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 26:
      • @ref: 68371
      • Chebi-ID: 32528
      • Metabolite: turanose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 27:
      • @ref: 68371
      • Chebi-ID: 28066
      • Metabolite: gentiobiose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 28:
      • @ref: 68371
      • Chebi-ID: 17151
      • Metabolite: xylitol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 29:
      • @ref: 68371
      • Chebi-ID: 28087
      • Metabolite: glycogen
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 30:
      • @ref: 68371
      • Chebi-ID: 28017
      • Metabolite: starch
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 31:
      • @ref: 68371
      • Chebi-ID: 16634
      • Metabolite: raffinose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 32:
      • @ref: 68371
      • Chebi-ID: 6731
      • Metabolite: melezitose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 33:
      • @ref: 68371
      • Chebi-ID: 15443
      • Metabolite: inulin
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 34:
      • @ref: 68371
      • Chebi-ID: 27082
      • Metabolite: trehalose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 35:
      • @ref: 68371
      • Chebi-ID: 17992
      • Metabolite: sucrose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 36:
      • @ref: 68371
      • Chebi-ID: 28053
      • Metabolite: melibiose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 37:
      • @ref: 68371
      • Chebi-ID: 17716
      • Metabolite: lactose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 38:
      • @ref: 68371
      • Chebi-ID: 17306
      • Metabolite: maltose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 39:
      • @ref: 68371
      • Chebi-ID: 17057
      • Metabolite: cellobiose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 40:
      • @ref: 68371
      • Chebi-ID: 17814
      • Metabolite: salicin
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 41:
      • @ref: 68371
      • Chebi-ID: 4853
      • Metabolite: esculin
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 42:
      • @ref: 68371
      • Chebi-ID: 18305
      • Metabolite: arbutin
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 43:
      • @ref: 68371
      • Chebi-ID: 27613
      • Metabolite: amygdalin
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 44:
      • @ref: 68371
      • Chebi-ID: 59640
      • Metabolite: N-acetylglucosamine
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 45:
      • @ref: 68371
      • Chebi-ID: 320061
      • Metabolite: methyl alpha-D-glucopyranoside
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 46:
      • @ref: 68371
      • Chebi-ID: 43943
      • Metabolite: methyl alpha-D-mannoside
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 47:
      • @ref: 68371
      • Chebi-ID: 17924
      • Metabolite: D-sorbitol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 48:
      • @ref: 68371
      • Chebi-ID: 16899
      • Metabolite: D-mannitol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 49:
      • @ref: 68371
      • Chebi-ID: 17268
      • Metabolite: myo-inositol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 50:
      • @ref: 68371
      • Chebi-ID: 16813
      • Metabolite: galactitol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 51:
      • @ref: 68371
      • Chebi-ID: 62345
      • Metabolite: L-rhamnose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 52:
      • @ref: 68371
      • Chebi-ID: 17266
      • Metabolite: L-sorbose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 53:
      • @ref: 68371
      • Chebi-ID: 16024
      • Metabolite: D-mannose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 54:
      • @ref: 68371
      • Chebi-ID: 15824
      • Metabolite: D-fructose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 55:
      • @ref: 68371
      • Chebi-ID: 17634
      • Metabolite: D-glucose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 56:
      • @ref: 68371
      • Chebi-ID: 12936
      • Metabolite: D-galactose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 57:
      • @ref: 68371
      • Chebi-ID: 74863
      • Metabolite: methyl beta-D-xylopyranoside
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 58:
      • @ref: 68371
      • Chebi-ID: 15963
      • Metabolite: ribitol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 59:
      • @ref: 68371
      • Chebi-ID: 65328
      • Metabolite: L-xylose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 60:
      • @ref: 68371
      • Chebi-ID: 65327
      • Metabolite: D-xylose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 61:
      • @ref: 68371
      • Chebi-ID: 16988
      • Metabolite: D-ribose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 62:
      • @ref: 68371
      • Chebi-ID: 30849
      • Metabolite: L-arabinose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 63:
      • @ref: 68371
      • Chebi-ID: 17108
      • Metabolite: D-arabinose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 64:
      • @ref: 68371
      • Chebi-ID: 17113
      • Metabolite: erythritol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 65:
      • @ref: 68371
      • Chebi-ID: 17754
      • Metabolite: glycerol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 66:
      • @ref: 68369
      • Chebi-ID: 25115
      • Metabolite: malate
      • Utilization activity: +
      • Kind of utilization tested: assimilation
    • 67:
      • @ref: 68369
      • Chebi-ID: 17128
      • Metabolite: adipate
      • Utilization activity: -
      • Kind of utilization tested: assimilation
    • 68:
      • @ref: 68369
      • Chebi-ID: 27689
      • Metabolite: decanoate
      • Utilization activity: -
      • Kind of utilization tested: assimilation
    • 69:
      • @ref: 68369
      • Chebi-ID: 24265
      • Metabolite: gluconate
      • Utilization activity: -
      • Kind of utilization tested: assimilation
    • 70:
      • @ref: 68369
      • Chebi-ID: 17306
      • Metabolite: maltose
      • Utilization activity: +
      • Kind of utilization tested: assimilation
    • 71:
      • @ref: 68369
      • Chebi-ID: 59640
      • Metabolite: N-acetylglucosamine
      • Utilization activity: +
      • Kind of utilization tested: assimilation
    • 72:
      • @ref: 68369
      • Chebi-ID: 16024
      • Metabolite: D-mannose
      • Utilization activity: +
      • Kind of utilization tested: assimilation
    • 73:
      • @ref: 68369
      • Chebi-ID: 30849
      • Metabolite: L-arabinose
      • Utilization activity: -
      • Kind of utilization tested: assimilation
    • 74:
      • @ref: 68369
      • Chebi-ID: 17634
      • Metabolite: D-glucose
      • Utilization activity: +
      • Kind of utilization tested: assimilation
    • 75:
      • @ref: 68369
      • Chebi-ID: 5291
      • Metabolite: gelatin
      • Utilization activity: +
      • Kind of utilization tested: hydrolysis
    • 76:
      • @ref: 68369
      • Chebi-ID: 4853
      • Metabolite: esculin
      • Utilization activity: +
      • Kind of utilization tested: hydrolysis
    • 77:
      • @ref: 68369
      • Chebi-ID: 16199
      • Metabolite: urea
      • Utilization activity: -
      • Kind of utilization tested: hydrolysis
    • 78:
      • @ref: 68369
      • Chebi-ID: 29016
      • Metabolite: arginine
      • Utilization activity: -
      • Kind of utilization tested: hydrolysis
    • 79:
      • @ref: 68369
      • Chebi-ID: 17634
      • Metabolite: D-glucose
      • Utilization activity: -
      • Kind of utilization tested: fermentation
    • 80:
      • @ref: 68369
      • Chebi-ID: 27897
      • Metabolite: tryptophan
      • Utilization activity: -
      • Kind of utilization tested: energy source
    • 81:
      • @ref: 68369
      • Chebi-ID: 17632
      • Metabolite: nitrate
      • Utilization activity: +
      • Kind of utilization tested: reduction
    • 82:
      • @ref: 120771
      • Chebi-ID: 16947
      • Metabolite: citrate
      • Utilization activity: +
      • Kind of utilization tested: carbon source
    • 83:
      • @ref: 120771
      • Chebi-ID: 4853
      • Metabolite: esculin
      • Utilization activity: +
      • Kind of utilization tested: hydrolysis
    • 84:
      • @ref: 120771
      • Chebi-ID: 17632
      • Metabolite: nitrate
      • Utilization activity: +
      • Kind of utilization tested: reduction
    • 85:
      • @ref: 120771
      • Chebi-ID: 16301
      • Metabolite: nitrite
      • Utilization activity: -
      • Kind of utilization tested: reduction
    • 86:
      • @ref: 120771
      • Chebi-ID: 17632
      • Metabolite: nitrate
      • Utilization activity: -
      • Kind of utilization tested: respiration
  • Antibiotic resistance:
    • 0:
      • @ref: 22951
      • ChEBI: 27902
      • Metabolite: tetracycline
      • Is antibiotic: yes
    • 1:
      • @ref: 22951
      • ChEBI: 6104
      • Metabolite: kanamycin
      • Is antibiotic: yes
    • 2:
      • @ref: 22951
      • ChEBI: 48923
      • Metabolite: erythromycin
      • Is antibiotic: yes
    • 3:
      • @ref: 22951
      • ChEBI: 28368
      • Metabolite: novobiocin
      • Is antibiotic: yes
    • 4:
      • @ref: 120771
      • Metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
      • Is antibiotic: yes
      • Is sensitive: no
      • Is resistant: yes
  • Metabolite production:
    • 0:
      • @ref: 68369
      • Chebi-ID: 35581
      • Metabolite: indole
      • Production: no
    • 1:
      • @ref: 120771
      • Chebi-ID: 35581
      • Metabolite: indole
      • Production: no
  • Metabolite tests:
    • @ref: 68369
    • Chebi-ID: 35581
    • Metabolite: indole
    • Indole test: -
  • Enzymes:
    • 0:
      • @ref: 22947
      • Value: alpha-chymotrypsin
      • Activity: -
      • Ec: 3.4.21.1
    • 1:
      • @ref: 22947
      • Value: alpha-galactosidase
      • Activity: -
      • Ec: 3.2.1.22
    • 2:
      • @ref: 22947
      • Value: alpha-glucosidase
      • Activity: +
      • Ec: 3.2.1.20
    • 3:
      • @ref: 22947
      • Value: beta-glucosidase
      • Activity: +
      • Ec: 3.2.1.21
    • 4:
      • @ref: 22947
      • Value: esterase (C 4)
      • Activity: +
    • 5:
      • @ref: 22947
      • Value: gelatinase
      • Activity: +
    • 6:
      • @ref: 22947
      • Value: lysine decarboxylase
      • Activity: +
      • Ec: 4.1.1.18
    • 7:
      • @ref: 22947
      • Value: cytochrome oxidase
      • Activity: -
      • Ec: 1.9.3.1
    • 8:
      • @ref: 22947
      • Value: valine arylamidase
      • Activity: -
    • 9:
      • @ref: 22947
      • Value: DNase
      • Activity: +
    • 10:
      • @ref: 68369
      • Value: gelatinase
      • Activity: +
    • 11:
      • @ref: 68369
      • Value: beta-glucosidase
      • Activity: +
      • Ec: 3.2.1.21
    • 12:
      • @ref: 68369
      • Value: urease
      • Activity: -
      • Ec: 3.5.1.5
    • 13:
      • @ref: 68369
      • Value: arginine dihydrolase
      • Activity: -
      • Ec: 3.5.3.6
    • 14:
      • @ref: 120771
      • Value: oxidase
      • Activity: +
    • 15:
      • @ref: 120771
      • Value: beta-galactosidase
      • Activity: -
      • Ec: 3.2.1.23
    • 16:
      • @ref: 120771
      • Value: alcohol dehydrogenase
      • Activity: -
      • Ec: 1.1.1.1
    • 17:
      • @ref: 120771
      • Value: gelatinase
      • Activity: +
    • 18:
      • @ref: 120771
      • Value: amylase
      • Activity: -
    • 19:
      • @ref: 120771
      • Value: caseinase
      • Activity: +
      • Ec: 3.4.21.50
    • 20:
      • @ref: 120771
      • Value: catalase
      • Activity: +
      • Ec: 1.11.1.6
    • 21:
      • @ref: 120771
      • Value: lecithinase
      • Activity: -
    • 22:
      • @ref: 120771
      • Value: lipase
      • Activity: +
    • 23:
      • @ref: 120771
      • Value: lysine decarboxylase
      • Activity: +
      • Ec: 4.1.1.18
    • 24:
      • @ref: 120771
      • Value: ornithine decarboxylase
      • Activity: -
      • Ec: 4.1.1.17
    • 25:
      • @ref: 120771
      • Value: urease
      • Activity: -
      • Ec: 3.5.1.5
    • 26:
      • @ref: 68382
      • Value: alkaline phosphatase
      • Activity: +
      • Ec: 3.1.3.1
    • 27:
      • @ref: 68382
      • Value: esterase (C 4)
      • Activity: +
    • 28:
      • @ref: 68382
      • Value: esterase lipase (C 8)
      • Activity: +
    • 29:
      • @ref: 68382
      • Value: lipase (C 14)
      • Activity: -
    • 30:
      • @ref: 68382
      • Value: leucine arylamidase
      • Activity: -
      • Ec: 3.4.11.1
    • 31:
      • @ref: 68382
      • Value: valine arylamidase
      • Activity: -
    • 32:
      • @ref: 68382
      • Value: cystine arylamidase
      • Activity: -
      • Ec: 3.4.11.3
    • 33:
      • @ref: 68382
      • Value: trypsin
      • Activity: +
      • Ec: 3.4.21.4
    • 34:
      • @ref: 68382
      • Value: alpha-chymotrypsin
      • Activity: -
      • Ec: 3.4.21.1
    • 35:
      • @ref: 68382
      • Value: acid phosphatase
      • Activity: +
      • Ec: 3.1.3.2
    • 36:
      • @ref: 68382
      • Value: naphthol-AS-BI-phosphohydrolase
      • Activity: +
    • 37:
      • @ref: 68382
      • Value: alpha-galactosidase
      • Activity: -
      • Ec: 3.2.1.22
    • 38:
      • @ref: 68382
      • Value: beta-galactosidase
      • Activity: -
      • Ec: 3.2.1.23
    • 39:
      • @ref: 68382
      • Value: beta-glucuronidase
      • Activity: -
      • Ec: 3.2.1.31
    • 40:
      • @ref: 68382
      • Value: alpha-glucosidase
      • Activity: -
      • Ec: 3.2.1.20
    • 41:
      • @ref: 68382
      • Value: beta-glucosidase
      • Activity: -
      • Ec: 3.2.1.21
    • 42:
      • @ref: 68382
      • Value: N-acetyl-beta-glucosaminidase
      • Activity: -
      • Ec: 3.2.1.52
    • 43:
      • @ref: 68382
      • Value: alpha-mannosidase
      • Activity: -
      • Ec: 3.2.1.24
    • 44:
      • @ref: 68382
      • Value: alpha-fucosidase
      • Activity: -
      • Ec: 3.2.1.51
  • API zym:
    • @ref: 120771
    • Control: -
    • Alkaline phosphatase: +
    • Esterase: +
    • Esterase Lipase: +
    • Lipase: -
    • Leucine arylamidase: -
    • Valine arylamidase: -
    • Cystine arylamidase: -
    • Trypsin: +
    • Alpha- Chymotrypsin: -
    • Acid phosphatase: +
    • Naphthol-AS-BI-phosphohydrolase: +
    • Alpha- Galactosidase: -
    • Beta- Galactosidase: -
    • Beta- Glucuronidase: -
    • Alpha- Glucosidase: -
    • Beta- Glucosidase: -
    • N-acetyl-beta- glucosaminidase: -
    • Alpha- Mannosidase: -
    • Alpha- Fucosidase: -
  • API 20NE:
    • 0:
      • @ref: 12669
      • NO3: +
      • TRP: -
      • GLU Ferm: -
      • ADH Arg: -
      • URE: -
      • ESC: +
      • GEL: +
      • PNPG: +/-
      • GLU Assim: +
      • ARA: -
      • MNE: +
      • MAN: -
      • NAG: +
      • MAL: +
      • GNT: -
      • CAP: -
      • ADI: -
      • MLT: +
      • CIT: +
      • PAC: -
      • OX: -
    • 1:
      • @ref: 12669
      • NO3: +
      • TRP: -
      • GLU Ferm: -
      • ADH Arg: -
      • URE: -
      • ESC: +
      • GEL: +
      • PNPG: +/-
      • GLU Assim: +
      • ARA: -
      • MNE: +
      • MAN: +
      • NAG: +
      • MAL: +
      • GNT: -
      • CAP: -
      • ADI: -
      • MLT: +
      • CIT: +
      • PAC: -
      • OX: +
  • API 50CHac:
    • @ref: 120771
    • GLY: -
    • ERY: -
    • DARA: -
    • LARA: -
    • RIB: -
    • DXYL: -
    • LXYL: -
    • ADO: -
    • MDX: -
    • GAL: -
    • GLU: -
    • FRU: -
    • MNE: -
    • SBE: -
    • RHA: -
    • DUL: -
    • INO: -
    • MAN: -
    • SOR: -
    • MDM: -
    • MDG: -
    • NAG: -
    • AMY: -
    • ARB: -
    • ESC: -
    • SAL: -
    • CEL: -
    • MAL: -
    • LAC: -
    • MEL: -
    • SAC: -
    • TRE: -
    • INU: -
    • MLZ: -
    • RAF: -
    • AMD: -
    • GLYG: -
    • XLT: -
    • GEN: -
    • TUR: -
    • LYX: -
    • TAG: -
    • DFUC: -
    • LFUC: -
    • DARL: -
    • LARL: -
    • GNT: -
    • 2KG: -
    • 5KG: -
  • API biotype100:
    • @ref: 120771
    • GLU: +
    • FRU: +
    • GAL: -
    • TRE: -
    • MNE: +
    • SBE: -
    • MEL: -
    • SAC: -
    • RAF: -
    • MTE: +
    • MAL: +
    • LAC: -
    • LTE: -
    • MbGa: -
    • MaGa: -
    • CEL: +
    • GEN: -
    • MbGu: -
    • ESC: +
    • RIB: -
    • ARA: -
    • XYL: -
    • PLE: -
    • RHA: -
    • FUC: -
    • MLZ: -
    • DARL: -
    • LARL: -
    • XLT: -
    • DUL: -
    • TAG: -
    • GLY: -
    • INO: -
    • MAN: -
    • MTL: -
    • TUR: -
    • SOR: -
    • ADO: -
    • HBG: -
    • LYX: -
    • ERY: -
    • MDG: -
    • 3MDG: -
    • SAT: -
    • MUC: -
    • LTAT: -
    • DTAT: -
    • MTAT: -
    • DMLT: -
    • LMLT: +
    • CATE: +
    • TATE: +
    • TTE: -
    • CIT: +
    • GRT: -
    • GAT: -
    • 2KG: -
    • 5KG: -
    • TRY: -
    • NAG: +
    • GNT: -
    • PAC: -
    • PAT: -
    • POBE: -
    • QAT: -
    • GTE: -
    • MOBE: -
    • BAT: -
    • PPAT: -
    • CMT: -
    • TGE: -
    • BET: -
    • PCE: -
    • ABT: -
    • HIN: -
    • LAT: +
    • CAP: -
    • CYT: -
    • HIS: -
    • SUC: +
    • FUM: +
    • GRE: -
    • GYT: -
    • AVT: -
    • ETN: -
    • TTN: -
    • GLN: +
    • ITA: -
    • 3OBU: -
    • APT: -
    • GTT: -
    • PRO: -
    • DALA: -
    • LALA: -
    • SER: -
    • MNT: -
    • PROP: -
    • TYR: -
    • 2KT: -

  • Isolation:
    • 0:
      • @ref: 12669
      • Sample type: oropharyngeal region of patient with cancer
    • 1:
      • @ref: 44868
      • Sample type: Oropharyngeal region of patient with mouth cancer
      • Sampling date: 1961
      • Country: USA
      • Origin.country: USA
      • Continent: North America
    • 2:
      • @ref: 67770
      • Sample type: Oropharyngeal region of patient with mouth cancer
    • 3:
      • @ref: 120771
      • Sample type: Human, Pharyngeal swab
      • Geographic location: Washington, D C
      • Country: United States of America
      • Origin.country: USA
      • Continent: North America
      • Isolation date: 1958-04-30
  • Isolation source categories:
    • 0:
      • Cat1: #Infection
      • Cat2: #Patient
    • 1:
      • Cat1: #Host Body-Site
      • Cat2: #Oral cavity and airways
  • Taxonmaps:
    • @ref: 69479
    • File name: preview.99_31.png
    • Url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_17;96_26;97_27;98_30;99_31&stattab=map
    • Last taxonomy: Stenotrophomonas
    • 16S sequence: LN681567
    • Sequence Identity: None
    • Total samples: 48176
    • Soil counts: 6245
    • Aquatic counts: 10099
    • Animal counts: 29572
    • Plant counts: 2260

  • Risk assessment:
    • 0:
      • @ref: 12669
      • Pathogenicity human: yes
      • Pathogenicity animal: yes
      • Biosafety level: 2
      • Biosafety level comment: Risk group (German classification)
    • 1:
      • @ref: 120771
      • Biosafety level: 1
      • Biosafety level comment: Risk group (French classification)

  • 16S sequences:
    • 0:
      • @ref: 20218
      • Description: Stenotrophomonas maltophilia gene for 16S rRNA, partial sequence, strain: ATCC 13637T
      • Accession: AB008509
      • Length: 1467
      • Database: nuccore
      • NCBI tax ID: 40324
    • 1:
      • @ref: 20218
      • Description: Stenotrophomonas maltophilia strain ATCC 13637 16S ribosomal RNA gene, partial sequence
      • Accession: FJ971878
      • Length: 797
      • Database: nuccore
      • NCBI tax ID: 40324
    • 2:
      • @ref: 20218
      • Description: Stenotrophomonas maltophilia strain ATCC 13637 16S ribosomal RNA gene, partial sequence
      • Accession: KC884850
      • Length: 501
      • Database: nuccore
      • NCBI tax ID: 40324
    • 3:
      • @ref: 20218
      • Description: Xanthomonas maltophilia 16S ribosomal RNA (16S rRNA) gene, transfer RNA-Ile (tRNA-Ile) gene, transfer RNA-Ala (tRNA-Ala) gene, 23S ribosomal RNA (23S rRNA) gene
      • Accession: L28166
      • Length: 725
      • Database: nuccore
      • NCBI tax ID: 40324
    • 4:
      • @ref: 20218
      • Description: Xanthomonas maltophilia 16S ribosomal RNA
      • Accession: M59158
      • Length: 1545
      • Database: nuccore
      • NCBI tax ID: 40324
    • 5:
      • @ref: 20218
      • Description: Stenotrophomonas maltophilia strain BCRC 10737 16S-23S ribosomal RNA intergenic spacer, complete sequence
      • Accession: EU014579
      • Length: 543
      • Database: nuccore
      • NCBI tax ID: 40324
    • 6:
      • @ref: 20218
      • Description: Stenotrophomonas maltophilia strain Cgmcc 1.1788 16S ribosomal RNA gene, partial sequence
      • Accession: DQ067559
      • Length: 1412
      • Database: nuccore
      • NCBI tax ID: 40324
    • 7:
      • @ref: 20218
      • Description: Stenotrophomonas maltophilia gene for 16S ribosomal RNA, partial sequence, strain: IAM 12423
      • Accession: AB294553
      • Length: 1538
      • Database: nuccore
      • NCBI tax ID: 40324
    • 8:
      • @ref: 20218
      • Description: S.maltophilia 16S rRNA gene, strain LMG 958-T
      • Accession: X95923
      • Length: 1500
      • Database: nuccore
      • NCBI tax ID: 40324
    • 9:
      • @ref: 20218
      • Description: Stenotrophomonas maltophilia gene for 16S rRNA, partial sequence, strain: NBRC 12690
      • Accession: AB680319
      • Length: 1470
      • Database: nuccore
      • NCBI tax ID: 40324
    • 10:
      • @ref: 20218
      • Description: Stenotrophomonas maltophilia gene for 16S rRNA, partial sequence, strain: NBRC 14161
      • Accession: AB680569
      • Length: 1470
      • Database: nuccore
      • NCBI tax ID: 40324
    • 11:
      • @ref: 12669
      • Description: Stenotrophomonas maltophilia partial 16S rRNA gene, type strain DSM 50170T
      • Accession: LN681567
      • Length: 1497
      • Database: nuccore
      • NCBI tax ID: 40324
    • 12:
      • @ref: 124043
      • Description: Stenotrophomonas maltophilia strain ATCC 13637 16S ribosomal RNA gene, partial sequence.
      • Accession: MW012640
      • Length: 1089
      • Database: nuccore
      • NCBI tax ID: 40324
    • 13:
      • @ref: 124043
      • Description: Stenotrophomonas maltophilia strain NBRC 14161 16S ribosomal RNA gene, partial sequence.
      • Accession: OQ608822
      • Length: 388
      • Database: nuccore
      • NCBI tax ID: 40324
    • 14:
      • @ref: 124043
      • Description: Stenotrophomonas maltophilia strain NBRC 14161 16S ribosomal RNA gene, partial sequence.
      • Accession: OQ875714
      • Length: 388
      • Database: nuccore
      • NCBI tax ID: 40324
    • 15:
      • @ref: 124043
      • Description: Stenotrophomonas maltophilia strain NBRC 14161 16S ribosomal RNA gene, partial sequence.
      • Accession: OQ875744
      • Length: 1470
      • Database: nuccore
      • NCBI tax ID: 40324
  • Genome sequences:
    • 0:
      • @ref: 66792
      • Description: Stenotrophomonas maltophilia NCTC10257
      • Accession: GCA_900186865
      • Assembly level: complete
      • Database: ncbi
      • NCBI tax ID: 40324
    • 1:
      • @ref: 66792
      • Description: Stenotrophomonas maltophilia ATCC 13637
      • Accession: GCA_001997185
      • Assembly level: scaffold
      • Database: ncbi
      • NCBI tax ID: 40324
    • 2:
      • @ref: 66792
      • Description: Stenotrophomonas maltophilia NBRC 14161
      • Accession: GCA_001591205
      • Assembly level: contig
      • Database: ncbi
      • NCBI tax ID: 1220593
    • 3:
      • @ref: 66792
      • Description: Stenotrophomonas maltophilia IAM 12423
      • Accession: GCA_900113425
      • Assembly level: scaffold
      • Database: ncbi
      • NCBI tax ID: 40324
    • 4:
      • @ref: 66792
      • Description: Stenotrophomonas maltophilia NBRC 14161
      • Accession: 1220593.3
      • Assembly level: wgs
      • Database: patric
      • NCBI tax ID: 1220593
    • 5:
      • @ref: 66792
      • Description: Stenotrophomonas maltophilia strain ATCC 13637
      • Accession: 40324.191
      • Assembly level: wgs
      • Database: patric
      • NCBI tax ID: 40324
    • 6:
      • @ref: 66792
      • Description: Stenotrophomonas maltophilia strain IAM 12423
      • Accession: 40324.1221
      • Assembly level: wgs
      • Database: patric
      • NCBI tax ID: 40324
    • 7:
      • @ref: 66792
      • Description: Stenotrophomonas maltophilia strain NCTC10257
      • Accession: 40324.252
      • Assembly level: complete
      • Database: patric
      • NCBI tax ID: 40324
    • 8:
      • @ref: 66792
      • Description: Stenotrophomonas maltophilia NBRC 14161
      • Accession: 2731957641
      • Assembly level: draft
      • Database: img
      • NCBI tax ID: 1220593
    • 9:
      • @ref: 66792
      • Description: Stenotrophomonas maltophilia IAM 12423
      • Accession: 2623620580
      • Assembly level: draft
      • Database: img
      • NCBI tax ID: 40324
    • 10:
      • @ref: 66792
      • Description: Stenotrophomonas maltophilia NCTC 10257
      • Accession: 2850698245
      • Assembly level: complete
      • Database: img
      • NCBI tax ID: 40324
    • 11:
      • @ref: 66792
      • Description: Stenotrophomonas maltophilia CGMCC 1.1788
      • Accession: GCA_025617355
      • Assembly level: scaffold
      • Database: ncbi
      • NCBI tax ID: 40324
  • GC content:
    • 0:
      • @ref: 67770
      • GC-content: 66.9
      • Method: thermal denaturation, midpoint method (Tm)
    • 1:
      • @ref: 67770
      • GC-content: 67

  • Lineage: cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia group
  • LineageEx:
    • Taxon:
      • 0:
        • TaxId: 131567
        • ScientificName: cellular organisms
        • Rank: no rank
      • 1:
        • TaxId: 2
        • ScientificName: Bacteria
        • Rank: superkingdom
      • 2:
        • TaxId: 1224
        • ScientificName: Pseudomonadota
        • Rank: phylum
      • 3:
        • TaxId: 1236
        • ScientificName: Gammaproteobacteria
        • Rank: class
      • 4:
        • TaxId: 135614
        • ScientificName: Lysobacterales
        • Rank: order
      • 5:
        • TaxId: 32033
        • ScientificName: Lysobacteraceae
        • Rank: family
      • 6:
        • TaxId: 40323
        • ScientificName: Stenotrophomonas
        • Rank: genus
      • 7:
        • TaxId: 995085
        • ScientificName: Stenotrophomonas maltophilia group
        • Rank: species group