BioRepo | Biosample

Other Information

Cell morphology:
- @ref: 118208
- Gram stain: positive
- Cell shape: rod-shaped
- Motility: yes
Colony morphology:
- @ref: 118208
- Hemolysis ability: 1

Culture medium:
- 0:
  - @ref: 41573
  - Name: MEDIUM 72- for trypto casein soja agar
  - Growth: yes
  - Composition: Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
- 1:
  - @ref: 2032
  - Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)
  - Growth: yes
  - Link: https://mediadive.dsmz.de/medium/693
  - Composition: Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
- 2:
  - @ref: 2032
  - Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
  - Growth: yes
  - Link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium92.pdf
- 3:
  - @ref: 118208
  - Name: CIP Medium 72
  - Growth: yes
  - Link: https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72
Culture temp:
- 0:
  - @ref: 2032
  - Growth: positive
  - Type: growth
  - Temperature: 30
- 1:
  - @ref: 41573
  - Growth: positive
  - Type: growth
  - Temperature: 30
- 2:
  - @ref: 44984
  - Growth: positive
  - Type: growth
  - Temperature: 30-37
- 3:
  - @ref: 67770
  - Growth: positive
  - Type: growth
  - Temperature: 30
- 4:
  - @ref: 118208
  - Growth: positive
  - Type: growth
  - Temperature: 22-45
- 5:
  - @ref: 118208
  - Growth: no
  - Type: growth
  - Temperature: 10
- 6:
  - @ref: 118208
  - Growth: no
  - Type: growth
  - Temperature: 55

Oxygen tolerance:
- @ref: 118208
- Oxygen tolerance: facultative anaerobe
Spore formation:
- @ref: 118208
- Spore formation: yes
Compound production:
- 0:
  - @ref: 2032
  - Compound: restriction endonuclease <i>Bce</i>14579
- 1:
  - @ref: 67770
  - Compound: Restriction endonuclease
Halophily:
- 0:
  - @ref: 118208
  - Salt: NaCl
  - Growth: positive
  - Tested relation: growth
  - Concentration: 0-6 %
- 1:
  - @ref: 118208
  - Salt: NaCl
  - Growth: no
  - Tested relation: growth
  - Concentration: 8 %
- 2:
  - @ref: 118208
  - Salt: NaCl
  - Growth: no
  - Tested relation: growth
  - Concentration: 10 %
Metabolite utilization:
- 0:
  - @ref: 68374
  - Chebi-ID: 17057
  - Metabolite: cellobiose
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 1:
  - @ref: 68374
  - Chebi-ID: 30911
  - Metabolite: sorbitol
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 2:
  - @ref: 68374
  - Chebi-ID: 27082
  - Metabolite: trehalose
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 3:
  - @ref: 68374
  - Chebi-ID: 62345
  - Metabolite: L-rhamnose
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 4:
  - @ref: 68374
  - Chebi-ID: 18333
  - Metabolite: D-arabitol
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 5:
  - @ref: 68374
  - Chebi-ID: 30849
  - Metabolite: L-arabinose
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 6:
  - @ref: 68374
  - Chebi-ID: 17992
  - Metabolite: sucrose
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 7:
  - @ref: 68374
  - Chebi-ID: 17634
  - Metabolite: D-glucose
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 8:
  - @ref: 68374
  - Chebi-ID: 18394
  - Metabolite: palatinose
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 9:
  - @ref: 68374
  - Chebi-ID: 15792
  - Metabolite: malonate
  - Utilization activity: -
  - Kind of utilization tested: assimilation
- 10:
  - @ref: 68374
  - Chebi-ID: 17306
  - Metabolite: maltose
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 11:
  - @ref: 68374
  - Chebi-ID: 15963
  - Metabolite: ribitol
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 12:
  - @ref: 68374
  - Metabolite: Potassium 5-ketogluconate
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 13:
  - @ref: 68374
  - Chebi-ID: 18024
  - Metabolite: D-galacturonic acid
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 14:
  - @ref: 68374
  - Chebi-ID: 18403
  - Metabolite: L-arabitol
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 15:
  - @ref: 68374
  - Chebi-ID: 16199
  - Metabolite: urea
  - Utilization activity: -
  - Kind of utilization tested: hydrolysis
- 16:
  - @ref: 68374
  - Chebi-ID: 25094
  - Metabolite: lysine
  - Utilization activity: -
  - Kind of utilization tested: degradation
- 17:
  - @ref: 68379
  - Chebi-ID: 28087
  - Metabolite: glycogen
  - Utilization activity: +
  - Kind of utilization tested: fermentation
- 18:
  - @ref: 68379
  - Chebi-ID: 17992
  - Metabolite: sucrose
  - Utilization activity: +
  - Kind of utilization tested: fermentation
- 19:
  - @ref: 68379
  - Chebi-ID: 17306
  - Metabolite: maltose
  - Utilization activity: +
  - Kind of utilization tested: fermentation
- 20:
  - @ref: 68379
  - Chebi-ID: 16899
  - Metabolite: D-mannitol
  - Utilization activity: -
  - Kind of utilization tested: fermentation
- 21:
  - @ref: 68379
  - Chebi-ID: 65327
  - Metabolite: D-xylose
  - Utilization activity: -
  - Kind of utilization tested: fermentation
- 22:
  - @ref: 68379
  - Chebi-ID: 16988
  - Metabolite: D-ribose
  - Utilization activity: +
  - Kind of utilization tested: fermentation
- 23:
  - @ref: 68379
  - Chebi-ID: 5291
  - Metabolite: gelatin
  - Utilization activity: +
  - Kind of utilization tested: hydrolysis
- 24:
  - @ref: 68379
  - Chebi-ID: 16199
  - Metabolite: urea
  - Utilization activity: -
  - Kind of utilization tested: hydrolysis
- 25:
  - @ref: 118208
  - Chebi-ID: 16947
  - Metabolite: citrate
  - Utilization activity: -
  - Kind of utilization tested: carbon source
- 26:
  - @ref: 118208
  - Chebi-ID: 4853
  - Metabolite: esculin
  - Utilization activity: +
  - Kind of utilization tested: hydrolysis
- 27:
  - @ref: 118208
  - Chebi-ID: 606565
  - Metabolite: hippurate
  - Utilization activity: -
  - Kind of utilization tested: hydrolysis
- 28:
  - @ref: 118208
  - Chebi-ID: 17632
  - Metabolite: nitrate
  - Utilization activity: +
  - Kind of utilization tested: reduction
- 29:
  - @ref: 118208
  - Chebi-ID: 16301
  - Metabolite: nitrite
  - Utilization activity: +
  - Kind of utilization tested: reduction
- 30:
  - @ref: 118208
  - Chebi-ID: 17632
  - Metabolite: nitrate
  - Utilization activity: +
  - Kind of utilization tested: respiration
- 31:
  - @ref: 68374
  - Chebi-ID: 17268
  - Metabolite: myo-inositol
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 32:
  - @ref: 68374
  - Chebi-ID: 27897
  - Metabolite: tryptophan
  - Utilization activity: -
  - Kind of utilization tested: energy source
- 33:
  - @ref: 68374
  - Chebi-ID: 16899
  - Metabolite: D-mannitol
  - Utilization activity: -
  - Kind of utilization tested: builds acid from
- 34:
  - @ref: 68374
  - Chebi-ID: 29016
  - Metabolite: arginine
  - Utilization activity: +
  - Kind of utilization tested: hydrolysis
- 35:
  - @ref: 68374
  - Chebi-ID: 18257
  - Metabolite: ornithine
  - Utilization activity: -
  - Kind of utilization tested: degradation
- 36:
  - @ref: 68379
  - Chebi-ID: 17716
  - Metabolite: lactose
  - Utilization activity: -
  - Kind of utilization tested: fermentation
- 37:
  - @ref: 68379
  - Chebi-ID: 4853
  - Metabolite: esculin
  - Utilization activity: +
  - Kind of utilization tested: hydrolysis
- 38:
  - @ref: 68379
  - Chebi-ID: 17632
  - Metabolite: nitrate
  - Utilization activity: +
  - Kind of utilization tested: reduction
- 39:
  - @ref: 68368
  - Chebi-ID: 30849
  - Metabolite: L-arabinose
  - Utilization activity: -
  - Kind of utilization tested: fermentation
- 40:
  - @ref: 68368
  - Chebi-ID: 28053
  - Metabolite: melibiose
  - Utilization activity: -
  - Kind of utilization tested: fermentation
- 41:
  - @ref: 68368
  - Chebi-ID: 62345
  - Metabolite: L-rhamnose
  - Utilization activity: -
  - Kind of utilization tested: fermentation
- 42:
  - @ref: 68368
  - Chebi-ID: 30911
  - Metabolite: sorbitol
  - Utilization activity: -
  - Kind of utilization tested: fermentation
- 43:
  - @ref: 68368
  - Chebi-ID: 17268
  - Metabolite: myo-inositol
  - Utilization activity: -
  - Kind of utilization tested: fermentation
- 44:
  - @ref: 68368
  - Chebi-ID: 16899
  - Metabolite: D-mannitol
  - Utilization activity: -
  - Kind of utilization tested: fermentation
- 45:
  - @ref: 68368
  - Chebi-ID: 5291
  - Metabolite: gelatin
  - Utilization activity: +
  - Kind of utilization tested: hydrolysis
- 46:
  - @ref: 68368
  - Chebi-ID: 27897
  - Metabolite: tryptophan
  - Utilization activity: -
  - Kind of utilization tested: energy source
- 47:
  - @ref: 68368
  - Chebi-ID: 16199
  - Metabolite: urea
  - Utilization activity: -
  - Kind of utilization tested: hydrolysis
- 48:
  - @ref: 68368
  - Chebi-ID: 16947
  - Metabolite: citrate
  - Utilization activity: -
  - Kind of utilization tested: assimilation
- 49:
  - @ref: 68368
  - Chebi-ID: 18257
  - Metabolite: ornithine
  - Utilization activity: -
  - Kind of utilization tested: degradation
- 50:
  - @ref: 68368
  - Chebi-ID: 25094
  - Metabolite: lysine
  - Utilization activity: -
  - Kind of utilization tested: degradation
- 51:
  - @ref: 68368
  - Chebi-ID: 29016
  - Metabolite: arginine
  - Utilization activity: +
  - Kind of utilization tested: hydrolysis
Metabolite production:
- 0:
  - @ref: 68374
  - Chebi-ID: 35581
  - Metabolite: indole
  - Production: no
- 1:
  - @ref: 118208
  - Chebi-ID: 35581
  - Metabolite: indole
  - Production: no
- 2:
  - @ref: 68368
  - Chebi-ID: 35581
  - Metabolite: indole
  - Production: no
- 3:
  - @ref: 68368
  - Chebi-ID: 16136
  - Metabolite: hydrogen sulfide
  - Production: no
Metabolite tests:
- 0:
  - @ref: 68374
  - Chebi-ID: 35581
  - Metabolite: indole
  - Indole test: -
- 1:
  - @ref: 118208
  - Chebi-ID: 15688
  - Metabolite: acetoin
  - Voges-proskauer-test: +
- 2:
  - @ref: 118208
  - Chebi-ID: 17234
  - Metabolite: glucose
  - Methylred-test: +
- 3:
  - @ref: 68368
  - Chebi-ID: 35581
  - Metabolite: indole
  - Indole test: -
Enzymes:
- 0:
  - @ref: 68382
  - Value: alpha-mannosidase
  - Activity: -
  - Ec: 3.2.1.24
- 1:
  - @ref: 68382
  - Value: alpha-fucosidase
  - Activity: -
  - Ec: 3.2.1.51
- 2:
  - @ref: 68382
  - Value: beta-glucosidase
  - Activity: -
  - Ec: 3.2.1.21
- 3:
  - @ref: 68382
  - Value: alpha-glucosidase
  - Activity: +
  - Ec: 3.2.1.20
- 4:
  - @ref: 68382
  - Value: beta-galactosidase
  - Activity: -
  - Ec: 3.2.1.23
- 5:
  - @ref: 68382
  - Value: beta-glucuronidase
  - Activity: -
  - Ec: 3.2.1.31
- 6:
  - @ref: 68382
  - Value: alpha-galactosidase
  - Activity: -
  - Ec: 3.2.1.22
- 7:
  - @ref: 68382
  - Value: acid phosphatase
  - Activity: +
  - Ec: 3.1.3.2
- 8:
  - @ref: 68382
  - Value: naphthol-AS-BI-phosphohydrolase
  - Activity: +
- 9:
  - @ref: 68382
  - Value: trypsin
  - Activity: +
  - Ec: 3.4.21.4
- 10:
  - @ref: 68382
  - Value: alpha-chymotrypsin
  - Activity: +
  - Ec: 3.4.21.1
- 11:
  - @ref: 68382
  - Value: cystine arylamidase
  - Activity: +
  - Ec: 3.4.11.3
- 12:
  - @ref: 68382
  - Value: leucine arylamidase
  - Activity: +
  - Ec: 3.4.11.1
- 13:
  - @ref: 68382
  - Value: lipase (C 14)
  - Activity: +
- 14:
  - @ref: 68382
  - Value: esterase lipase (C 8)
  - Activity: +
- 15:
  - @ref: 68382
  - Value: alkaline phosphatase
  - Activity: +
  - Ec: 3.1.3.1
- 16:
  - @ref: 68382
  - Value: esterase (C 4)
  - Activity: +
- 17:
  - @ref: 118208
  - Value: oxidase
  - Activity: -
- 18:
  - @ref: 118208
  - Value: beta-galactosidase
  - Activity: -
  - Ec: 3.2.1.23
- 19:
  - @ref: 118208
  - Value: alcohol dehydrogenase
  - Activity: +
  - Ec: 1.1.1.1
- 20:
  - @ref: 118208
  - Value: gelatinase
  - Activity: +
- 21:
  - @ref: 118208
  - Value: amylase
  - Activity: +
- 22:
  - @ref: 118208
  - Value: DNase
  - Activity: -
- 23:
  - @ref: 118208
  - Value: caseinase
  - Activity: +
  - Ec: 3.4.21.50
- 24:
  - @ref: 118208
  - Value: catalase
  - Activity: +
  - Ec: 1.11.1.6
- 25:
  - @ref: 118208
  - Value: tween esterase
  - Activity: +
- 26:
  - @ref: 118208
  - Value: gamma-glutamyltransferase
  - Activity: -
  - Ec: 2.3.2.2
- 27:
  - @ref: 118208
  - Value: lecithinase
  - Activity: +
- 28:
  - @ref: 118208
  - Value: lysine decarboxylase
  - Activity: -
  - Ec: 4.1.1.18
- 29:
  - @ref: 118208
  - Value: ornithine decarboxylase
  - Activity: -
  - Ec: 4.1.1.17
- 30:
  - @ref: 118208
  - Value: urease
  - Activity: -
  - Ec: 3.5.1.5
- 31:
  - @ref: 68374
  - Value: beta-galactosidase
  - Activity: -
  - Ec: 3.2.1.23
- 32:
  - @ref: 68374
  - Value: urease
  - Activity: -
  - Ec: 3.5.1.5
- 33:
  - @ref: 68374
  - Value: ornithine decarboxylase
  - Activity: -
  - Ec: 4.1.1.17
- 34:
  - @ref: 68379
  - Value: beta-glucosidase
  - Activity: +
  - Ec: 3.2.1.21
- 35:
  - @ref: 68379
  - Value: alkaline phosphatase
  - Activity: +
  - Ec: 3.1.3.1
- 36:
  - @ref: 68368
  - Value: arginine dihydrolase
  - Activity: +
  - Ec: 3.5.3.6
- 37:
  - @ref: 68368
  - Value: beta-galactosidase
  - Activity: -
  - Ec: 3.2.1.23
- 38:
  - @ref: 68382
  - Value: N-acetyl-beta-glucosaminidase
  - Activity: -
  - Ec: 3.2.1.52
- 39:
  - @ref: 68382
  - Value: valine arylamidase
  - Activity: +
- 40:
  - @ref: 68374
  - Value: L-aspartate arylamidase
  - Activity: -
  - Ec: 3.4.11.21
- 41:
  - @ref: 68374
  - Value: alpha-maltosidase
  - Activity: +
- 42:
  - @ref: 68374
  - Value: alpha-galactosidase
  - Activity: -
  - Ec: 3.2.1.22
- 43:
  - @ref: 68374
  - Value: alpha-glucosidase
  - Activity: +
  - Ec: 3.2.1.20
- 44:
  - @ref: 68374
  - Value: N-acetyl-beta-glucosaminidase
  - Activity: -
  - Ec: 3.2.1.52
- 45:
  - @ref: 68374
  - Value: beta-glucuronidase
  - Activity: -
  - Ec: 3.2.1.31
- 46:
  - @ref: 68374
  - Value: beta-glucosidase
  - Activity: +
  - Ec: 3.2.1.21
- 47:
  - @ref: 68374
  - Value: lipase
  - Activity: -
- 48:
  - @ref: 68374
  - Value: lysine decarboxylase
  - Activity: -
  - Ec: 4.1.1.18
- 49:
  - @ref: 68374
  - Value: arginine dihydrolase
  - Activity: +
  - Ec: 3.5.3.6
- 50:
  - @ref: 68379
  - Value: catalase
  - Activity: +
  - Ec: 1.11.1.6
- 51:
  - @ref: 68379
  - Value: gelatinase
  - Activity: +
- 52:
  - @ref: 68379
  - Value: urease
  - Activity: -
  - Ec: 3.5.1.5
- 53:
  - @ref: 68379
  - Value: N-acetyl-beta-glucosaminidase
  - Activity: +
  - Ec: 3.2.1.52
- 54:
  - @ref: 68379
  - Value: alpha-glucosidase
  - Activity: +
  - Ec: 3.2.1.20
- 55:
  - @ref: 68379
  - Value: beta-galactosidase
  - Activity: -
  - Ec: 3.2.1.23
- 56:
  - @ref: 68379
  - Value: beta-glucuronidase
  - Activity: -
  - Ec: 3.2.1.31
- 57:
  - @ref: 68379
  - Value: pyrrolidonyl arylamidase
  - Activity: +
  - Ec: 3.4.19.3
- 58:
  - @ref: 68379
  - Value: pyrazinamidase
  - Activity: +
  - Ec: 3.5.1.B15
- 59:
  - @ref: 68368
  - Value: cytochrome oxidase
  - Activity: -
  - Ec: 1.9.3.1
- 60:
  - @ref: 68368
  - Value: gelatinase
  - Activity: +
- 61:
  - @ref: 68368
  - Value: tryptophan deaminase
  - Activity: -
  - Ec: 4.1.99.1
- 62:
  - @ref: 68368
  - Value: urease
  - Activity: -
  - Ec: 3.5.1.5
- 63:
  - @ref: 68368
  - Value: ornithine decarboxylase
  - Activity: -
  - Ec: 4.1.1.17
- 64:
  - @ref: 68368
  - Value: lysine decarboxylase
  - Activity: -
  - Ec: 4.1.1.18
API coryne:
- @ref: 44984
- NIT: +
- PYZ: +
- PYRA: +
- PAL: +
- Beta GUR: -
- Beta GAL: -
- Alpha GLU: +
- Beta NAG: +
- ESC: +
- URE: -
- GEL: +
- Control: -
- RIB: +
- XYL: -
- MAN: -
- MAL: +
- LAC: -
- SAC: +
- GLYG: +
- CAT: +
API zym:
- @ref: 118208
- Control: -
- Alkaline phosphatase: +
- Esterase: +
- Esterase Lipase: +
- Lipase: +
- Leucine arylamidase: +
- Valine arylamidase: +
- Cystine arylamidase: +
- Trypsin: +
- Alpha- Chymotrypsin: +
- Acid phosphatase: +
- Naphthol-AS-BI-phosphohydrolase: +
- Alpha- Galactosidase: -
- Beta- Galactosidase: -
- Beta- Glucuronidase: -
- Alpha- Glucosidase: +
- Beta- Glucosidase: -
- N-acetyl-beta- glucosaminidase: -
- Alpha- Mannosidase: -
- Alpha- Fucosidase: -
API 20E:
- 0:
  - @ref: 2032
  - ONPG: -
  - ADH Arg: +
  - LDC Lys: -
  - ODC: -
  - CIT: -
  - H2S: -
  - URE: -
  - TDA Trp: -
  - IND: -
  - VP: -
  - GEL: +
  - GLU: +/-
  - MAN: -
  - INO: -
  - Sor: -
  - RHA: -
  - SAC: +/-
  - MEL: -
  - AMY: +/-
  - ARA: -
  - OX: -
- 1:
  - @ref: 2032
  - ONPG: -
  - ADH Arg: +
  - LDC Lys: -
  - ODC: -
  - CIT: -
  - H2S: -
  - URE: -
  - TDA Trp: -
  - IND: -
  - VP: +/-
  - GEL: +
  - GLU: +
  - MAN: -
  - INO: -
  - Sor: -
  - RHA: -
  - SAC: +
  - MEL: -
  - AMY: +
  - ARA: -
  - OX: -
API ID32E:
- @ref: 44984
- ODC: -
- ADH Arg: +
- LDC Lys: -
- URE: -
- LARL: -
- GAT: -
- 5KG: -
- LIP: -
- RP: +
- Beta GLU: +
- MAN: -
- MAL: -
- ADO: -
- PLE: -
- Beta GUR: -
- MNT: -
- IND: -
- Beta NAG: -
- Beta GAL: -
- GLU: -
- SAC: -
- LARA: -
- DARL: -
- Alpha GLU: +
- Alpha GAL: -
- TRE: -
- RHA: -
- INO: -
- CEL: -
- SOR: -
- AlphaMAL: +
- AspA: -
API biotype100:
- @ref: 118208
- GLU: +
- FRU: +
- GAL: -
- TRE: +
- MNE: -
- SBE: -
- MEL: -
- SAC: +
- RAF: -
- MTE: +
- MAL: +
- LAC: -
- LTE: -
- MbGa: -
- MaGa: -
- CEL: +
- GEN: -
- MbGu: +
- ESC: +
- RIB: +
- ARA: -
- XYL: -
- PLE: -
- RHA: -
- FUC: -
- MLZ: -
- DARL: -
- LARL: -
- XLT: -
- DUL: -
- TAG: -
- GLY: +
- INO: -
- MAN: -
- MTL: -
- TUR: -
- SOR: -
- ADO: -
- HBG: -
- LYX: -
- ERY: -
- MDG: -
- 3MDG: -
- SAT: -
- MUC: -
- LTAT: -
- DTAT: -
- MTAT: -
- DMLT: -
- LMLT: +
- CATE: -
- TATE: -
- TTE: -
- CIT: +
- GRT: -
- GAT: -
- 2KG: -
- 5KG: -
- TRY: -
- NAG: +
- GNT: +
- PAC: -
- PAT: -
- POBE: -
- QAT: -
- GTE: -
- MOBE: -
- BAT: -
- PPAT: -
- CMT: -
- TGE: -
- BET: -
- PCE: -
- ABT: +
- HIN: -
- LAT: +
- CAP: -
- CYT: -
- HIS: +
- SUC: +
- FUM: +
- GRE: -
- GYT: -
- AVT: -
- ETN: -
- TTN: -
- GLN: +
- ITA: -
- 3OBU: +
- APT: +
- GTT: +
- PRO: +
- DALA: -
- LALA: +
- SER: +
- MNT: -
- PROP: +
- TYR: -
- 2KT: +

Taxonmaps:
- @ref: 69479
- File name: preview.99_26.png
- Url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_21;97_22;98_25;99_26&stattab=map
- Last taxonomy: Bacillus
- 16S sequence: DQ207729
- Sequence Identity: None
- Total samples: 4969
- Soil counts: 1920
- Aquatic counts: 446
- Animal counts: 1524
- Plant counts: 1079

Risk assessment:
- 0:
  - @ref: 2032
  - Biosafety level: 2
  - Biosafety level comment: Risk group (German classification)
- 1:
  - @ref: 118208
  - Biosafety level: 1
  - Biosafety level comment: Risk group (French classification)

16S sequences:
- 0:
  - @ref: 20218
  - Description: Bacillus cereus strain ATCC14579 16S ribosomal RNA gene, partial sequence
  - Accession: AF290547
  - Length: 1482
  - Database: nuccore
  - NCBI tax ID: 226900
- 1:
  - @ref: 20218
  - Description: Bacillus cereus 16S-23S rRNA intergenic spacer, DNA sequence
  - Accession: L37576
  - Length: 143
  - Database: nuccore
  - NCBI tax ID: 1396
- 2:
  - @ref: 20218
  - Description: Bacillus cereus strain CCM 2010 16S ribosomal RNA gene, complete sequence
  - Accession: DQ207729
  - Length: 1535
  - Database: nuccore
  - NCBI tax ID: 1396
- 3:
  - @ref: 20218
  - Description: Bacillus cereus partial 16S rRNA gene and ITS1, strain DSM 31
  - Accession: AJ841873
  - Length: 542
  - Database: nuccore
  - NCBI tax ID: 1396
- 4:
  - @ref: 20218
  - Description: B.cereus DNA for 16S and 23S rRNA and spacer region
  - Accession: X89896
  - Length: 231
  - Database: nuccore
  - NCBI tax ID: 1396
- 5:
  - @ref: 20218
  - Description: B.cereus 23S rDNA and 16S-23S spacer region
  - Accession: X94448
  - Length: 2978
  - Database: nuccore
  - NCBI tax ID: 1396
- 6:
  - @ref: 20218
  - Description: Bacillus cereus gene for 16S rRNA, partial sequence, strain: IAM 12605
  - Accession: D16266
  - Length: 1486
  - Database: nuccore
  - NCBI tax ID: 1396
- 7:
  - @ref: 20218
  - Description: Bacillus cereus gene for 16S rRNA, partial sequence
  - Accession: AB006922
  - Length: 277
  - Database: nuccore
  - NCBI tax ID: 1396
- 8:
  - @ref: 20218
  - Description: Bacillus cereus gene for 16S rRNA, partial sequence, strain: GTC 02826
  - Accession: AB592491
  - Length: 1425
  - Database: nuccore
  - NCBI tax ID: 1396
- 9:
  - @ref: 20218
  - Description: Bacillus cereus gene for 16S rRNA, partial sequence, strain: JCM 2152
  - Accession: AB598737
  - Length: 1474
  - Database: nuccore
  - NCBI tax ID: 1396
- 10:
  - @ref: 20218
  - Description: Bacillus cereus gene for 16S rRNA, partial sequence
  - Accession: AB271745
  - Length: 1476
  - Database: nuccore
  - NCBI tax ID: 1396
- 11:
  - @ref: 20218
  - Description: B.cereus 16S ribosomal RNA
  - Accession: X55060
  - Length: 1450
  - Database: nuccore
  - NCBI tax ID: 1396
- 12:
  - @ref: 124043
  - Description: Bacillus cereus strain IAM 12605 16S ribosomal RNA gene, partial sequence.
  - Accession: MZ700619
  - Length: 754
  - Database: nuccore
  - NCBI tax ID: 1396
- 13:
  - @ref: 124043
  - Description: Bacillus cereus strain ATCC 14579 16s 16S ribosomal RNA gene, partial sequence.
  - Accession: OQ028258
  - Length: 1512
  - Database: nuccore
  - NCBI tax ID: 1396
- 14:
  - @ref: 124043
  - Description: Bacillus cereus strain IAM 12605 16S ribosomal RNA gene, partial sequence.
  - Accession: OQ331047
  - Length: 1055
  - Database: nuccore
  - NCBI tax ID: 1396
- 15:
  - @ref: 124043
  - Description: Bacillus cereus ATCC 14579 16S ribosomal RNA gene, partial sequence.
  - Accession: OQ456631
  - Length: 855
  - Database: nuccore
  - NCBI tax ID: 226900
- 16:
  - @ref: 124043
  - Description: Bacillus cereus ATCC 14579 16S ribosomal RNA gene, partial sequence.
  - Accession: OQ618952
  - Length: 1348
  - Database: nuccore
  - NCBI tax ID: 226900
- 17:
  - @ref: 124043
  - Description: Bacillus cereus strain ATCC 14579(T) 16S ribosomal RNA gene, partial sequence.
  - Accession: OQ938962
  - Length: 809
  - Database: nuccore
  - NCBI tax ID: 1396
- 18:
  - @ref: 124043
  - Description: Bacillus cereus ATCC 14579 16S ribosomal RNA gene, partial sequence.
  - Accession: OR186720
  - Length: 595
  - Database: nuccore
  - NCBI tax ID: 226900
- 19:
  - @ref: 124043
  - Description: Bacillus cereus ATCC 14579 16S ribosomal RNA gene, partial sequence.
  - Accession: OR420086
  - Length: 1373
  - Database: nuccore
  - NCBI tax ID: 226900
- 20:
  - @ref: 124043
  - Description: Bacillus cereus ATCC 14579 16S ribosomal RNA gene, partial sequence.
  - Accession: OR842813
  - Length: 1437
  - Database: nuccore
  - NCBI tax ID: 226900
Genome sequences:
- 0:
  - @ref: 66792
  - Description: Bacillus cereus ATCC 14579
  - Accession: GCA_006094295
  - Assembly level: complete
  - Database: ncbi
  - NCBI tax ID: 226900
- 1:
  - @ref: 66792
  - Description: Bacillus cereus ATCC 14579
  - Accession: GCA_000007825
  - Assembly level: complete
  - Database: ncbi
  - NCBI tax ID: 226900
- 2:
  - @ref: 66792
  - Description: Bacillus cereus ATCC 14579
  - Accession: 226900.82
  - Assembly level: plasmid
  - Database: patric
  - NCBI tax ID: 226900
- 3:
  - @ref: 66792
  - Description: Bacillus cereus ATCC 14579
  - Accession: 226900.113
  - Assembly level: complete
  - Database: patric
  - NCBI tax ID: 226900
- 4:
  - @ref: 66792
  - Description: Bacillus cereus ATCC 14579
  - Accession: 226900.8
  - Assembly level: complete
  - Database: patric
  - NCBI tax ID: 226900
- 5:
  - @ref: 66792
  - Description: Bacillus cereus strain FSL M8-0473
  - Accession: 1396.725
  - Assembly level: wgs
  - Database: patric
  - NCBI tax ID: 1396
- 6:
  - @ref: 66792
  - Description: Bacillus cereus strain NCTC2599
  - Accession: 1396.2169
  - Assembly level: wgs
  - Database: patric
  - NCBI tax ID: 1396
- 7:
  - @ref: 66792
  - Description: Bacillus cereus ATCC 14579
  - Accession: 637000017
  - Assembly level: complete
  - Database: img
  - NCBI tax ID: 226900
- 8:
  - @ref: 67770
  - Description: Bacillus cereus NCTC2599
  - Accession: GCA_900445355
  - Assembly level: contig
  - Database: ncbi
  - NCBI tax ID: 1396
GC content:
- 0:
  - @ref: 2032
  - GC-content: 36.2
  - Method: Buoyant density centrifugation (BD)
- 1:
  - @ref: 2032
  - GC-content: 35.7
  - Method: thermal denaturation, midpoint method (Tm)
- 2:
  - @ref: 67770
  - GC-content: 35.6
  - Method: fluorimetric

Key: 4954374275
DatasetKey: 50c9509d-22c7-4a22-a47d-8c48425ef4a7
PublishingOrgKey: 28eb1a3f-1c15-4a95-931a-4af90ecb574d
InstallationKey: 997448a8-f762-11e1-a439-00145eb45e9a
HostingOrganizationKey: 28eb1a3f-1c15-4a95-931a-4af90ecb574d
PublishingCountry: US
Protocol: DWC_ARCHIVE
LastCrawled: 2025-06-24T16:48:00.587+00:00
LastParsed: 2025-06-25T02:45:11.458+00:00
CrawlId: 551
ProjectId: https://www.inaturalist.org/projects/human-hosts|https://www.inaturalist.org/projects/microscopy|https://www.inaturalist.org/projects/new-york-city-ecoflora
Extensions:
- Http://rs.gbif.org/terms/1.0/Multimedia:
  - 0:
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    - Http://purl.org/dc/terms/type: StillImage
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  - 1:
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BasisOfRecord: HUMAN_OBSERVATION
OccurrenceStatus: PRESENT
TaxonKey: 5428132
KingdomKey: 3
PhylumKey: 87
ClassKey: 303
OrderKey: 576
FamilyKey: 8113
GenusKey: 3227637
SpeciesKey: 5428132
AcceptedTaxonKey: 5428132
ScientificName: Bacillus cereus Frankland & Frankland, 1887
AcceptedScientificName: Bacillus cereus Frankland & Frankland, 1887
Kingdom: Bacteria
Phylum: Firmicutes
Order: Bacillales
Family: Bacillaceae
Genus: Bacillus
Species: Bacillus cereus
GenericName: Bacillus
SpecificEpithet: cereus
TaxonRank: SPECIES
TaxonomicStatus: ACCEPTED
IucnRedListCategory: NE
DateIdentified: 2024-10-08T19:14:17
DecimalLatitude: 40.841311
DecimalLongitude: -73.94067
Continent: NORTH_AMERICA
StateProvince: New York
Gadm:
- Level0:
  - Gid: USA
  - Name: United States
- Level1:
  - Gid: USA.33_1
  - Name: New York
- Level2:
  - Gid: USA.33.32_1
  - Name: New York
Year: 2024
Month: 10
Day: 1
EventDate: 2024-10-01
StartDayOfYear: 275
EndDayOfYear: 275
Issues:
- 0: CONTINENT_DERIVED_FROM_COORDINATES
- 1: TAXON_MATCH_TAXON_ID_IGNORED
Modified: 2025-04-12T01:13:52.000+00:00
LastInterpreted: 2025-06-25T02:45:11.458+00:00
References: https://www.inaturalist.org/observations/246362064
License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
IsSequenced: False
Identifiers:
- 0:
  - Identifier: 246362064
Media:
- 0:
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  - Format: image/jpeg
  - References: https://www.inaturalist.org/photos/439795550
  - Created: 2024-10-08T21:11:23.000+00:00
  - Creator: Ansel Oommen
  - Publisher: iNaturalist
  - License: http://creativecommons.org/licenses/by-nc/4.0/
  - RightsHolder: Ansel Oommen
  - Identifier: https://inaturalist-open-data.s3.amazonaws.com/photos/439795550/original.jpg
- 1:
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  - Format: image/jpeg
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  - Created: 2024-10-08T21:10:13.000+00:00
  - Creator: Ansel Oommen
  - Publisher: iNaturalist
  - License: http://creativecommons.org/licenses/by-nc/4.0/
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  - Identifier: https://inaturalist-open-data.s3.amazonaws.com/photos/439795535/original.jpg
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  - Created: 2024-10-08T21:12:32.000+00:00
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  - Publisher: iNaturalist
  - License: http://creativecommons.org/licenses/by-nc/4.0/
  - RightsHolder: Ansel Oommen
  - Identifier: https://inaturalist-open-data.s3.amazonaws.com/photos/439795544/original.jpg
Facts:
Relations:
IsInCluster: False
DatasetName: iNaturalist research-grade observations
RecordedBy: Ansel Oommen
IdentifiedBy: Ansel Oommen
DnaSequenceID:
GeodeticDatum: WGS84
Class: Bacilli
CountryCode: US
RecordedByIDs:
IdentifiedByIDs:
GbifRegion: NORTH_AMERICA
Country: United States of America
PublishedByGbifRegion: NORTH_AMERICA
RightsHolder: Ansel Oommen
Identifier: 246362064
Http://unknown.org/nick: ansel_oommen
VerbatimEventDate: 2024-10-01
CollectionCode: Observations
GbifID: 4954374275
VerbatimLocality: Columbia University Medical Center
OccurrenceID: https://www.inaturalist.org/observations/246362064
TaxonID: 950431
Http://unknown.org/captive cultivated: wild
CatalogNumber: 246362064
InstitutionCode: iNaturalist
OccurrenceRemarks: Isolated from human host; IDed by MALDI-TOF
IdentificationID: 550306986

Lineage: cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group
LineageEx:
- Taxon:
  - 0:
    - TaxId: 131567
    - ScientificName: cellular organisms
    - Rank: cellular root
  - 1:
    - TaxId: 2
    - ScientificName: Bacteria
    - Rank: domain
  - 2:
    - TaxId: 1783272
    - ScientificName: Bacillati
    - Rank: kingdom
  - 3:
    - TaxId: 1239
    - ScientificName: Bacillota
    - Rank: phylum
  - 4:
    - TaxId: 91061
    - ScientificName: Bacilli
    - Rank: class
  - 5:
    - TaxId: 1385
    - ScientificName: Bacillales
    - Rank: order
  - 6:
    - TaxId: 186817
    - ScientificName: Bacillaceae
    - Rank: family
  - 7:
    - TaxId: 1386
    - ScientificName: Bacillus
    - Rank: genus
  - 8:
    - TaxId: 86661
    - ScientificName: Bacillus cereus group
    - Rank: species group

General Information

Sample Information

Other Information

General Information

Sample Information

Other Information

Morphology

Culture and growth conditions

Physiology and metabolism

Isolation, sampling and environmental information

Safety information

Sequence information

Occurence (geoference records)

Name and taxonomic classification