General Information

Title Lactiplantibacillus plantarum InaCC B 1399
Organism Lactiplantibacillus plantarum
Sample Type Microbe
Description
External Links
Description URL
None

Sample Information

Sample Attribute
Sample Name InaCC B 1399
Sample Title Lactiplantibacillus plantarum InaCC B 1399
Description
Taxonomy ID 1590
Bioproject Id
Locus Tag Prefix
Strain InaCC B 1399
Isolate N/A
Isolation Source N/A
Host N/A
Lab Host
Biomaterial Provider
Sample Type cell culture
Collection Date N/A
Geographic Location Name N/A
Latitude Longitude
Environmental Biome
Depth
Altitude
Collected By
Culture Collection
Genotype
Host Tissue Sampled
Identified By
Mating Type
Passage History
Sample Size
Serotype
Serovar
Specimen Voucher
Temperature
Organism 1012
Center PUSAT RISET KOMPUTASI
Lab Pusat Sekuensing
Submitter Inna Syafarina
Submitted at 16-11-2023
Published at 16-11-2023

Other Information

  • Key: 4153309340
  • DatasetKey: 393b8c26-e4e0-4dd0-a218-93fc074ebf4e
  • PublishingOrgKey: ada9d123-ddb4-467d-8891-806ea8d94230
  • InstallationKey: 17a83780-3060-4851-9d6f-029d5fcb81c9
  • HostingOrganizationKey: fbca90e3-8aed-48b1-84e3-369afbd000ce
  • PublishingCountry: GB
  • Protocol: EML
  • LastCrawled: 2024-10-19T12:02:47.594+00:00
  • LastParsed: 2024-10-19T12:23:29.755+00:00
  • CrawlId: 189
  • Extensions:
  • BasisOfRecord: MATERIAL_SAMPLE
  • OccurrenceStatus: PRESENT
  • TaxonKey: 11210941
  • KingdomKey: 3
  • PhylumKey: 87
  • ClassKey: 303
  • OrderKey: 577
  • FamilyKey: 4711
  • GenusKey: 10723052
  • SpeciesKey: 10792529
  • AcceptedTaxonKey: 11210941
  • ScientificName: Lactiplantibacillus plantarum subsp. plantarum
  • AcceptedScientificName: Lactiplantibacillus plantarum subsp. plantarum
  • Kingdom: Bacteria
  • Phylum: Firmicutes
  • Order: Lactobacillales
  • Family: Lactobacillaceae
  • Genus: Lactiplantibacillus
  • Species: Lactiplantibacillus plantarum
  • GenericName: Lactiplantibacillus
  • SpecificEpithet: plantarum
  • InfraspecificEpithet: plantarum
  • TaxonRank: SUBSPECIES
  • TaxonomicStatus: ACCEPTED
  • Gadm:
  • Year: 2023
  • Month: 1
  • Day: 1
  • EventDate: 2023-01-01
  • StartDayOfYear: 1
  • EndDayOfYear: 1
  • Issues:
    • 0: TAXON_MATCH_TAXON_CONCEPT_ID_IGNORED
    • 1: TAXON_MATCH_TAXON_ID_IGNORED
  • LastInterpreted: 2024-10-19T12:23:29.755+00:00
  • References: https://www.ebi.ac.uk/ena/browser/view/OQ547261
  • License: http://creativecommons.org/licenses/by/4.0/legalcode
  • IsSequenced: True
  • AssociatedSequences: https://www.ebi.ac.uk/ena/browser/api/embl/OQ547261
  • Identifiers:
    • 0:
      • Identifier: OQ547261
  • Media:
  • Facts:
  • Relations:
  • IsInCluster: False
  • IdentifiedBy: Alsayed Essam Mekky
  • Class: Bacilli
  • CountryCode: EG
  • RecordedByIDs:
  • IdentifiedByIDs:
  • Country: Egypt
  • GbifRegion: AFRICA
  • PublishedByGbifRegion: EUROPE
  • Identifier: OQ547261
  • TaxonConceptID: https://www.ebi.ac.uk/ena/browser/view/Taxon:337330
  • AssociatedTaxa: Bos taurus
  • OccurrenceRemarks: Lactiplantibacillus plantarum subsp. plantarum strain MK-19-2-4 16S ribosomal RNA gene, partial sequence.
  • GbifID: 4153309340
  • OccurrenceID: OQ547261
  • TaxonID: ASV:d6e6024b8ed3bcccb0d0367f501f7cb0

  • Cell morphology:
    • @ref: 121666
    • Gram stain: positive
    • Cell shape: rod-shaped
    • Motility: no

  • Culture medium:
    • 0:
      • @ref: 8592
      • Name: MRS MEDIUM (DSMZ Medium 11)
      • Growth: yes
      • Link: https://mediadive.dsmz.de/medium/11
      • Composition: Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
    • 1:
      • @ref: 35498
      • Name: MEDIUM 41- for Lactobacillus, Leuconostoc, Weissella, Pediococcus, Sporolactobacillus inulinus
      • Growth: yes
      • Composition: Distilled water make up to (1000.000 ml);Man Rogosa Sharp broth (55.000 g)
    • 2:
      • @ref: 121666
      • Name: CIP Medium 41
      • Growth: yes
      • Link: https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=41
  • Culture temp:
    • 0:
      • @ref: 8592
      • Growth: positive
      • Type: growth
      • Temperature: 30
    • 1:
      • @ref: 35498
      • Growth: positive
      • Type: growth
      • Temperature: 37
    • 2:
      • @ref: 67770
      • Growth: positive
      • Type: growth
      • Temperature: 30

  • Oxygen tolerance:
    • @ref: 121666
    • Oxygen tolerance: facultative anaerobe
  • Compound production:
    • 0:
      • @ref: 8592
      • Compound: acetic acid
    • 1:
      • @ref: 8592
      • Compound: lactic acid
  • Murein:
    • @ref: 8592
    • Murein short key: A31
    • Type: A1gamma m-Dpm-direct
  • Observation:
    • @ref: 67770
    • Observation: Assay of Biotin, nicotinic and pantothenic acids
  • Metabolite utilization:
    • 0:
      • @ref: 68371
      • Metabolite: Potassium 5-ketogluconate
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 1:
      • @ref: 68371
      • Metabolite: Potassium 2-ketogluconate
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 2:
      • @ref: 68371
      • Chebi-ID: 18403
      • Metabolite: L-arabitol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 3:
      • @ref: 68371
      • Chebi-ID: 18287
      • Metabolite: L-fucose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 4:
      • @ref: 68371
      • Chebi-ID: 28847
      • Metabolite: D-fucose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 5:
      • @ref: 68371
      • Chebi-ID: 16443
      • Metabolite: D-tagatose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 6:
      • @ref: 68371
      • Chebi-ID: 62318
      • Metabolite: D-lyxose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 7:
      • @ref: 68371
      • Chebi-ID: 17151
      • Metabolite: xylitol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 8:
      • @ref: 68371
      • Chebi-ID: 28087
      • Metabolite: glycogen
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 9:
      • @ref: 68371
      • Chebi-ID: 28017
      • Metabolite: starch
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 10:
      • @ref: 68371
      • Chebi-ID: 16634
      • Metabolite: raffinose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 11:
      • @ref: 68371
      • Chebi-ID: 6731
      • Metabolite: melezitose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 12:
      • @ref: 68371
      • Chebi-ID: 15443
      • Metabolite: inulin
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 13:
      • @ref: 68371
      • Chebi-ID: 27082
      • Metabolite: trehalose
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 14:
      • @ref: 68371
      • Chebi-ID: 17992
      • Metabolite: sucrose
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 15:
      • @ref: 68371
      • Chebi-ID: 28053
      • Metabolite: melibiose
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 16:
      • @ref: 68371
      • Chebi-ID: 17716
      • Metabolite: lactose
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 17:
      • @ref: 68371
      • Chebi-ID: 17306
      • Metabolite: maltose
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 18:
      • @ref: 68371
      • Chebi-ID: 17057
      • Metabolite: cellobiose
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 19:
      • @ref: 68371
      • Chebi-ID: 17814
      • Metabolite: salicin
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 20:
      • @ref: 68371
      • Chebi-ID: 4853
      • Metabolite: esculin
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 21:
      • @ref: 68371
      • Chebi-ID: 18305
      • Metabolite: arbutin
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 22:
      • @ref: 68371
      • Chebi-ID: 27613
      • Metabolite: amygdalin
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 23:
      • @ref: 68371
      • Chebi-ID: 59640
      • Metabolite: N-acetylglucosamine
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 24:
      • @ref: 68371
      • Chebi-ID: 320061
      • Metabolite: methyl alpha-D-glucopyranoside
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 25:
      • @ref: 68371
      • Chebi-ID: 43943
      • Metabolite: methyl alpha-D-mannoside
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 26:
      • @ref: 68371
      • Chebi-ID: 16899
      • Metabolite: D-mannitol
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 27:
      • @ref: 68371
      • Chebi-ID: 17268
      • Metabolite: myo-inositol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 28:
      • @ref: 68371
      • Chebi-ID: 16813
      • Metabolite: galactitol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 29:
      • @ref: 68371
      • Chebi-ID: 17266
      • Metabolite: L-sorbose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 30:
      • @ref: 68371
      • Chebi-ID: 16024
      • Metabolite: D-mannose
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 31:
      • @ref: 68371
      • Chebi-ID: 15824
      • Metabolite: D-fructose
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 32:
      • @ref: 68371
      • Chebi-ID: 17634
      • Metabolite: D-glucose
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 33:
      • @ref: 68371
      • Chebi-ID: 12936
      • Metabolite: D-galactose
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 34:
      • @ref: 68371
      • Chebi-ID: 74863
      • Metabolite: methyl beta-D-xylopyranoside
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 35:
      • @ref: 68371
      • Chebi-ID: 15963
      • Metabolite: ribitol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 36:
      • @ref: 68371
      • Chebi-ID: 65328
      • Metabolite: L-xylose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 37:
      • @ref: 68371
      • Chebi-ID: 65327
      • Metabolite: D-xylose
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 38:
      • @ref: 68371
      • Chebi-ID: 16988
      • Metabolite: D-ribose
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 39:
      • @ref: 68371
      • Chebi-ID: 30849
      • Metabolite: L-arabinose
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 40:
      • @ref: 68371
      • Chebi-ID: 17108
      • Metabolite: D-arabinose
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 41:
      • @ref: 68371
      • Chebi-ID: 17113
      • Metabolite: erythritol
      • Utilization activity: -
      • Kind of utilization tested: builds acid from
    • 42:
      • @ref: 68371
      • Chebi-ID: 17754
      • Metabolite: glycerol
      • Utilization activity: +
      • Kind of utilization tested: builds acid from
    • 43:
      • @ref: 121666
      • Chebi-ID: 17632
      • Metabolite: nitrate
      • Utilization activity: -
      • Kind of utilization tested: reduction
    • 44:
      • @ref: 121666
      • Chebi-ID: 16301
      • Metabolite: nitrite
      • Utilization activity: -
      • Kind of utilization tested: reduction
  • Metabolite production:
    • @ref: 121666
    • Chebi-ID: 35581
    • Metabolite: indole
    • Production: no
  • Enzymes:
    • 0:
      • @ref: 68382
      • Value: alpha-fucosidase
      • Activity: -
      • Ec: 3.2.1.51
    • 1:
      • @ref: 68382
      • Value: alpha-mannosidase
      • Activity: -
      • Ec: 3.2.1.24
    • 2:
      • @ref: 68382
      • Value: N-acetyl-beta-glucosaminidase
      • Activity: +
      • Ec: 3.2.1.52
    • 3:
      • @ref: 68382
      • Value: beta-glucosidase
      • Activity: +
      • Ec: 3.2.1.21
    • 4:
      • @ref: 68382
      • Value: alpha-glucosidase
      • Activity: +
      • Ec: 3.2.1.20
    • 5:
      • @ref: 68382
      • Value: beta-glucuronidase
      • Activity: -
      • Ec: 3.2.1.31
    • 6:
      • @ref: 68382
      • Value: beta-galactosidase
      • Activity: +
      • Ec: 3.2.1.23
    • 7:
      • @ref: 68382
      • Value: alpha-galactosidase
      • Activity: +
      • Ec: 3.2.1.22
    • 8:
      • @ref: 68382
      • Value: naphthol-AS-BI-phosphohydrolase
      • Activity: +
    • 9:
      • @ref: 68382
      • Value: acid phosphatase
      • Activity: +
      • Ec: 3.1.3.2
    • 10:
      • @ref: 68382
      • Value: alpha-chymotrypsin
      • Activity: -
      • Ec: 3.4.21.1
    • 11:
      • @ref: 68382
      • Value: trypsin
      • Activity: -
      • Ec: 3.4.21.4
    • 12:
      • @ref: 68382
      • Value: cystine arylamidase
      • Activity: -
      • Ec: 3.4.11.3
    • 13:
      • @ref: 68382
      • Value: valine arylamidase
      • Activity: -
    • 14:
      • @ref: 68382
      • Value: leucine arylamidase
      • Activity: +
      • Ec: 3.4.11.1
    • 15:
      • @ref: 68382
      • Value: lipase (C 14)
      • Activity: -
    • 16:
      • @ref: 68382
      • Value: esterase lipase (C 8)
      • Activity: -
    • 17:
      • @ref: 68382
      • Value: esterase (C 4)
      • Activity: -
    • 18:
      • @ref: 68382
      • Value: alkaline phosphatase
      • Activity: +
      • Ec: 3.1.3.1
    • 19:
      • @ref: 121666
      • Value: oxidase
      • Activity: -
    • 20:
      • @ref: 121666
      • Value: catalase
      • Activity: -
      • Ec: 1.11.1.6
    • 21:
      • @ref: 121666
      • Value: urease
      • Activity: -
      • Ec: 3.5.1.5
  • API zym:
    • @ref: 121666
    • Control: -
    • Alkaline phosphatase: +
    • Esterase: -
    • Esterase Lipase: -
    • Lipase: -
    • Leucine arylamidase: +
    • Valine arylamidase: -
    • Cystine arylamidase: -
    • Trypsin: -
    • Alpha- Chymotrypsin: -
    • Acid phosphatase: +
    • Naphthol-AS-BI-phosphohydrolase: +
    • Alpha- Galactosidase: +
    • Beta- Galactosidase: +
    • Beta- Glucuronidase: -
    • Alpha- Glucosidase: +
    • Beta- Glucosidase: +
    • N-acetyl-beta- glucosaminidase: +
    • Alpha- Mannosidase: -
    • Alpha- Fucosidase: -
  • API 50CHac:
    • 0:
      • @ref: 8592
      • Q: -
      • GLY: +
      • ERY: -
      • DARA: -
      • LARA: +
      • RIB: +
      • DXYL: +
      • LXYL: -
      • ADO: -
      • MDX: -
      • GAL: +
      • GLU: +
      • FRU: +
      • MNE: +
      • SBE: -
      • RHA: -
      • DUL: -
      • INO: -
      • MAN: +
      • SOR: +
      • MDM: -
      • MDG: -
      • NAG: +
      • AMY: +
      • ARB: +
      • ESC: +
      • SAL: +
      • CEL: +
      • MAL: +
      • LAC: +
      • MEL: +
      • SAC: +
      • TRE: +
      • INU: -
      • MLZ: -
      • RAF: -
      • AMD: -
      • GLYG: -
      • XLT: -
      • GEN: +
      • TUR: -
      • LYX: -
      • TAG: -
      • DFUC: -
      • LFUC: -
      • DARL: -
      • LARL: -
      • GNT: -
      • 2KG: -
      • 5KG: -
    • 1:
      • @ref: 8592
      • Q: -
      • GLY: +
      • ERY: -
      • DARA: -
      • LARA: +
      • RIB: +
      • DXYL: +
      • LXYL: -
      • ADO: -
      • MDX: -
      • GAL: +
      • GLU: +
      • FRU: +
      • MNE: +
      • SBE: -
      • RHA: -
      • DUL: -
      • INO: -
      • MAN: +
      • SOR: +
      • MDM: -
      • MDG: -
      • NAG: +
      • AMY: +
      • ARB: +
      • ESC: +
      • SAL: +
      • CEL: +
      • MAL: +
      • LAC: +
      • MEL: +
      • SAC: +
      • TRE: +
      • INU: -
      • MLZ: -
      • RAF: -
      • AMD: -
      • GLYG: -
      • XLT: -
      • GEN: -
      • TUR: -
      • LYX: -
      • TAG: -
      • DFUC: -
      • LFUC: -
      • DARL: -
      • LARL: -
      • GNT: -
      • 2KG: -
      • 5KG: -
    • 2:
      • @ref: 8592
      • Q: -
      • GLY: +
      • ERY: -
      • DARA: -
      • LARA: +
      • RIB: +
      • DXYL: +
      • LXYL: -
      • ADO: -
      • MDX: -
      • GAL: +
      • GLU: +
      • FRU: +
      • MNE: +
      • SBE: -
      • RHA: +/-
      • DUL: -
      • INO: -
      • MAN: +
      • SOR: +
      • MDM: -
      • MDG: -
      • NAG: +
      • AMY: +
      • ARB: +
      • ESC: +
      • SAL: +
      • CEL: +
      • MAL: +
      • LAC: +
      • MEL: +
      • SAC: +
      • TRE: +
      • INU: -
      • MLZ: -
      • RAF: -
      • AMD: -
      • GLYG: -
      • XLT: -
      • GEN: +
      • TUR: +/-
      • LYX: -
      • TAG: -
      • DFUC: -
      • LFUC: -
      • DARL: +/-
      • LARL: -
      • GNT: +
      • 2KG: -
      • 5KG: -
    • 3:
      • @ref: 8592
      • Q: -
      • GLY: +
      • ERY: -
      • DARA: -
      • LARA: +
      • RIB: +
      • DXYL: +
      • LXYL: -
      • ADO: -
      • MDX: -
      • GAL: +
      • GLU: +
      • FRU: +
      • MNE: +
      • SBE: -
      • RHA: +/-
      • DUL: -
      • INO: -
      • MAN: +
      • SOR: +
      • MDM: -
      • MDG: -
      • NAG: +
      • AMY: +
      • ARB: +
      • ESC: +
      • SAL: +
      • CEL: +
      • MAL: +
      • LAC: +
      • MEL: +
      • SAC: +
      • TRE: +
      • INU: -
      • MLZ: -
      • RAF: -
      • AMD: -
      • GLYG: -
      • XLT: -
      • GEN: +
      • TUR: +/-
      • LYX: -
      • TAG: -
      • DFUC: -
      • LFUC: -
      • DARL: +/-
      • LARL: -
      • GNT: +
      • 2KG: -
      • 5KG: -
    • 4:
      • @ref: 121666
      • GLY: +
      • ERY: -
      • DARA: -
      • LARA: +
      • RIB: +
      • DXYL: +
      • LXYL: -
      • ADO: -
      • MDX: -
      • GAL: +
      • GLU: +
      • FRU: +
      • MNE: +
      • SBE: -
      • RHA: +/-
      • DUL: -
      • INO: -
      • MAN: +
      • SOR: -
      • MDM: -
      • MDG: -
      • NAG: +
      • AMY: +
      • ARB: +
      • ESC: +
      • SAL: +
      • CEL: +
      • MAL: +
      • LAC: +
      • MEL: +
      • SAC: +
      • TRE: +
      • INU: -
      • MLZ: -
      • RAF: -
      • AMD: -
      • GLYG: -
      • XLT: -
      • GEN: +
      • TUR: -
      • LYX: -
      • TAG: -
      • DFUC: -
      • LFUC: -
      • DARL: -
      • LARL: -
      • GNT: -
      • 2KG: -
      • 5KG: -

  • Isolation:
    • @ref: 67770
    • Sample type: Corn silage
  • Taxonmaps:
    • @ref: 69479
    • File name: preview.99_195.png
    • Url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_45;96_140;97_151;98_168;99_195&stattab=map
    • Last taxonomy: Lactobacillaceae
    • 16S sequence: LC071808
    • Sequence Identity: None
    • Total samples: 38637
    • Soil counts: 2696
    • Aquatic counts: 4479
    • Animal counts: 29069
    • Plant counts: 2393

  • Risk assessment:
    • 0:
      • @ref: 8592
      • Biosafety level: 1
      • Biosafety level comment: Risk group (German classification)
    • 1:
      • @ref: 121666
      • Biosafety level: 1
      • Biosafety level comment: Risk group (French classification)

  • 16S sequences:
    • 0:
      • @ref: 20218
      • Description: Lactobacillus plantarum ATCC 8041 16S ribosomal RNA gene, partial sequence
      • Accession: AF429521
      • Length: 506
      • Database: nuccore
      • NCBI tax ID: 1590
    • 1:
      • @ref: 20218
      • Description: Lactobacillus plantarum strain ATCC 8041 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence
      • Accession: AF429608
      • Length: 516
      • Database: nuccore
      • NCBI tax ID: 1590
    • 2:
      • @ref: 20218
      • Description: Lactobacillus pentosus gene for 16S rRNA, partial sequence
      • Accession: D79211
      • Length: 1519
      • Database: nuccore
      • NCBI tax ID: 1589
    • 3:
      • @ref: 20218
      • Description: Lactobacillus pentosus 16S/23S ribosomal RNA small intergenic spacer region, complete sequence
      • Accession: U97134
      • Length: 205
      • Database: nuccore
      • NCBI tax ID: 1589
    • 4:
      • @ref: 20218
      • Description: Lactobacillus pentosus 16S/23S ribosomal RNA large intergenic spacer region, tRNA-Ile and tRNA-Ala genes, complete sequence
      • Accession: U97140
      • Length: 439
      • Database: nuccore
      • NCBI tax ID: 1589
    • 5:
      • @ref: 20218
      • Description: Lactobacillus pentosus gene for 16S rRNA, partial sequence, strain: JCM 1558
      • Accession: AB289240
      • Length: 622
      • Database: nuccore
      • NCBI tax ID: 1589
    • 6:
      • @ref: 67770
      • Description: Lactobacillus pentosus gene for 16S ribosomal RNA, partial sequence, strain: JCM 1558
      • Accession: LC071808
      • Length: 1460
      • Database: nuccore
      • NCBI tax ID: 1589
    • 7:
      • @ref: 124043
      • Description: Lactobacillus pentosus gene for 16S rRNA, partial sequence, strain: NBRC 106467.
      • Accession: AB626060
      • Length: 1492
      • Database: nuccore
      • NCBI tax ID: 1589
  • Genome sequences:
    • 0:
      • @ref: 66792
      • Description: Lactiplantibacillus pentosus DSM 20314
      • Accession: GCA_003641185
      • Assembly level: complete
      • Database: ncbi
      • NCBI tax ID: 1589
    • 1:
      • @ref: 66792
      • Description: Lactobacillus pentosus DSM 20314
      • Accession: 1423791.3
      • Assembly level: wgs
      • Database: patric
      • NCBI tax ID: 1423791
    • 2:
      • @ref: 66792
      • Description: Lactobacillus pentosus strain ATCC 8041
      • Accession: 1589.100
      • Assembly level: wgs
      • Database: patric
      • NCBI tax ID: 1589
    • 3:
      • @ref: 66792
      • Description: Lactobacillus pentosus strain DSM 20314
      • Accession: 1589.90
      • Assembly level: complete
      • Database: patric
      • NCBI tax ID: 1589
    • 4:
      • @ref: 66792
      • Description: Lactobacillus pentosus strain NBRC 106467
      • Accession: 1589.102
      • Assembly level: wgs
      • Database: patric
      • NCBI tax ID: 1589
    • 5:
      • @ref: 66792
      • Description: Lactiplantibacillus pentosus DSM 20314
      • Accession: 2700989129
      • Assembly level: draft
      • Database: img
      • NCBI tax ID: 1423791
    • 6:
      • @ref: 66792
      • Description: Lactiplantibacillus pentosus DSM 20314
      • Accession: 2896846605
      • Assembly level: complete
      • Database: img
      • NCBI tax ID: 1423791
    • 7:
      • @ref: 67770
      • Description: Lactiplantibacillus pentosus DSM 20314
      • Accession: GCA_001433755
      • Assembly level: scaffold
      • Database: ncbi
      • NCBI tax ID: 1423791
    • 8:
      • @ref: 67770
      • Description: Lactiplantibacillus pentosus NBRC 106467
      • Accession: GCA_007991835
      • Assembly level: contig
      • Database: ncbi
      • NCBI tax ID: 1589
    • 9:
      • @ref: 67770
      • Description: Lactiplantibacillus pentosus ATCC 8041
      • Accession: GCA_004354685
      • Assembly level: scaffold
      • Database: ncbi
      • NCBI tax ID: 1589
  • GC content:
    • 0:
      • @ref: 8592
      • GC-content: 46.1
    • 1:
      • @ref: 67770
      • GC-content: 46.1
      • Method: thermal denaturation, midpoint method (Tm)
    • 2:
      • @ref: 67770
      • GC-content: 43.8

  • Lineage: cellular organisms; Bacteria; Terrabacteria group; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactiplantibacillus
  • LineageEx:
    • Taxon:
      • 0:
        • TaxId: 131567
        • ScientificName: cellular organisms
        • Rank: no rank
      • 1:
        • TaxId: 2
        • ScientificName: Bacteria
        • Rank: superkingdom
      • 2:
        • TaxId: 1783272
        • ScientificName: Terrabacteria group
        • Rank: clade
      • 3:
        • TaxId: 1239
        • ScientificName: Bacillota
        • Rank: phylum
      • 4:
        • TaxId: 91061
        • ScientificName: Bacilli
        • Rank: class
      • 5:
        • TaxId: 186826
        • ScientificName: Lactobacillales
        • Rank: order
      • 6:
        • TaxId: 33958
        • ScientificName: Lactobacillaceae
        • Rank: family
      • 7:
        • TaxId: 2767842
        • ScientificName: Lactiplantibacillus
        • Rank: genus