General Information

Title Streptomyces mirabilis InaCC A 1015
Organism Streptomyces mirabilis
Sample Type Microbe
Description
External Links
Description URL
None

Sample Information

Sample Attribute
Sample Name InaCC A 1015
Sample Title Streptomyces mirabilis InaCC A 1015
Description
Taxonomy ID 68239
Bioproject Id
Locus Tag Prefix
Strain InaCC A 1015
Isolate N/A
Isolation Source N/A
Host N/A
Lab Host
Biomaterial Provider
Sample Type cell culture
Collection Date N/A
Geographic Location Name N/A
Latitude Longitude
Environmental Biome
Depth
Altitude
Collected By
Culture Collection
Genotype
Host Tissue Sampled
Identified By
Mating Type
Passage History
Sample Size
Serotype
Serovar
Specimen Voucher
Temperature
Organism 1024
Center PUSAT RISET KOMPUTASI
Lab Pusat Sekuensing
Submitter Inna Syafarina
Submitted at 16-11-2023
Published at 16-11-2023

Other Information

  • Key: 4439309063
  • DatasetKey: 7e9d3bc6-bb85-42a5-8826-fe2b27552e2c
  • PublishingOrgKey: 10edba3c-8fe0-4a8c-8767-312d0e2badb5
  • InstallationKey: f66ca88d-1f6a-49dc-b33b-32960faee57e
  • HostingOrganizationKey: fbca90e3-8aed-48b1-84e3-369afbd000ce
  • PublishingCountry: LK
  • Protocol: EML
  • LastCrawled: 2024-07-02T10:12:33.795+00:00
  • LastParsed: 2024-07-02T10:14:10.464+00:00
  • CrawlId: 35
  • Extensions:
  • BasisOfRecord: MACHINE_OBSERVATION
  • IndividualCount: 7
  • OccurrenceStatus: PRESENT
  • TaxonKey: 11007237
  • KingdomKey: 3
  • PhylumKey: 10813635
  • ClassKey: 10701801
  • OrderKey: 10857265
  • FamilyKey: 8091
  • GenusKey: 2584528
  • SpeciesKey: 11007237
  • AcceptedTaxonKey: 11007237
  • ScientificName: Streptomyces mirabilis_C
  • AcceptedScientificName: Streptomyces mirabilis_C
  • Kingdom: Bacteria
  • Phylum: Actinobacteriota
  • Order: Streptomycetales
  • Family: Streptomycetaceae
  • Genus: Streptomyces
  • Species: Streptomyces mirabilis
  • GenericName: Streptomyces
  • SpecificEpithet: mirabilis
  • TaxonRank: SPECIES
  • TaxonomicStatus: ACCEPTED
  • DecimalLatitude: 6.141744
  • DecimalLongitude: 81.119378
  • Continent: ASIA
  • Gadm:
    • Level0:
      • Gid: LKA
      • Name: Sri Lanka
    • Level1:
      • Gid: LKA.8_1
      • Name: Hambantota
    • Level2:
      • Gid: LKA.8.4_1
      • Name: Hambantota
  • Year: 2022
  • Month: 5
  • Day: 29
  • EventDate: 2022-05-29
  • StartDayOfYear: 149
  • EndDayOfYear: 149
  • Issues:
  • LastInterpreted: 2024-07-02T10:14:10.464+00:00
  • License: http://creativecommons.org/publicdomain/zero/1.0/legalcode
  • OrganismQuantity: 7.0
  • OrganismQuantityType: individuals
  • IsSequenced: False
  • Identifiers:
    • 0:
      • Identifier: V4R27_260
  • Media:
  • Facts:
  • Relations:
  • IsInCluster: False
  • SamplingProtocol: eDNA sampling from soil
  • GeodeticDatum: WGS84
  • Class: Actinomycetia
  • CountryCode: LK
  • RecordedByIDs:
  • IdentifiedByIDs:
  • Country: Sri Lanka
  • GbifRegion: ASIA
  • PublishedByGbifRegion: ASIA
  • EventID: V4R27
  • Identifier: V4R27_260
  • GbifID: 4439309063
  • OccurrenceID: V4R27_260

  • Multimedia:
    • @ref: 9636
    • Multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_40553.jpg
    • Caption: Medium 84 28°C
    • Intellectual property rights: © Leibniz-Institut DSMZ

  • Culture medium:
    • 0:
      • @ref: 9636
      • Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
      • Growth: yes
      • Link: https://mediadive.dsmz.de/medium/65
      • Composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
    • 1:
      • @ref: 9636
      • Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)
      • Growth: yes
      • Link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf
  • Culture temp:
    • 0:
      • @ref: 9636
      • Growth: positive
      • Type: growth
      • Temperature: 28
    • 1:
      • @ref: 67770
      • Growth: positive
      • Type: growth
      • Temperature: 28

  • Compound production:
    • 0:
      • @ref: 9636
      • Compound: miramycin
    • 1:
      • @ref: 67770
      • Compound: Miramycin

  • Taxonmaps:
    • @ref: 69479
    • File name: preview.99_3832.png
    • Url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_109;98_2301;99_3832&stattab=map
    • Last taxonomy: Streptomyces
    • 16S sequence: AF112180
    • Sequence Identity: None
    • Total samples: 2480
    • Soil counts: 1454
    • Aquatic counts: 120
    • Animal counts: 56
    • Plant counts: 850

  • Risk assessment:
    • @ref: 9636
    • Biosafety level: 1
    • Biosafety level comment: Risk group (German classification)

  • 16S sequences:
    • 0:
      • @ref: 20218
      • Description: Streptomyces mirabilis strain ATCC27447 16S ribosomal RNA gene, partial sequence
      • Accession: AF112180
      • Length: 1466
      • Database: nuccore
      • NCBI tax ID: 68239
    • 1:
      • @ref: 20218
      • Description: Streptomyces mirabilis strain DSM 40553 16S ribosomal RNA gene, partial sequence
      • Accession: AY999730
      • Length: 1448
      • Database: nuccore
      • NCBI tax ID: 68239
    • 2:
      • @ref: 20218
      • Description: Streptomyces mirabilis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4791
      • Accession: D44366
      • Length: 120
      • Database: nuccore
      • NCBI tax ID: 68239
    • 3:
      • @ref: 20218
      • Description: Streptomyces mirabilis gene for 16S rRNA, partial sequence, strain: NBRC 13450
      • Accession: AB184412
      • Length: 1472
      • Database: nuccore
      • NCBI tax ID: 68239
  • Genome sequences:
    • 0:
      • @ref: 66792
      • Description: Streptomyces mirabilis JCM 4551
      • Accession: GCA_014650275
      • Assembly level: scaffold
      • Database: ncbi
      • NCBI tax ID: 68239
    • 1:
      • @ref: 66792
      • Description: Streptomyces mirabilis strain JCM 4551
      • Accession: 68239.8
      • Assembly level: wgs
      • Database: patric
      • NCBI tax ID: 68239

  • Lineage: cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Kitasatosporales; Streptomycetaceae; Streptomyces
  • LineageEx:
    • Taxon:
      • 0:
        • TaxId: 131567
        • ScientificName: cellular organisms
        • Rank: no rank
      • 1:
        • TaxId: 2
        • ScientificName: Bacteria
        • Rank: superkingdom
      • 2:
        • TaxId: 1783272
        • ScientificName: Terrabacteria group
        • Rank: clade
      • 3:
        • TaxId: 201174
        • ScientificName: Actinomycetota
        • Rank: phylum
      • 4:
        • TaxId: 1760
        • ScientificName: Actinomycetes
        • Rank: class
      • 5:
        • TaxId: 85011
        • ScientificName: Kitasatosporales
        • Rank: order
      • 6:
        • TaxId: 2062
        • ScientificName: Streptomycetaceae
        • Rank: family
      • 7:
        • TaxId: 1883
        • ScientificName: Streptomyces
        • Rank: genus