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General Information
Title Pseudomonas sp. InaCC B1348
Organism Pseudomonas sp.
Sample Type Microbe
Description
External Links
Description URL
None

Sample Information
Sample Attribute
Sample Name InaCC B1348
Sample Title Pseudomonas sp. InaCC B1348
Description
Taxonomy ID 306
Bioproject Id
Locus Tag Prefix
Strain InaCC B1348
Isolate N/A
Isolation Source N/A
Host N/A
Lab Host
Biomaterial Provider
Sample Type cell culture
Collection Date N/A
Geographic Location Name N/A
Latitude Longitude
Environmental Biome
Depth
Altitude
Collected By
Culture Collection
Genotype
Host Tissue Sampled
Identified By
Mating Type
Passage History
Sample Size
Serotype
Serovar
Specimen Voucher
Temperature
Organism 240
Center PUSAT RISET KOMPUTASI
Lab Pusat Sekuensing
Submitter Inna Syafarina
Submitted at 16-11-2023
Published at 16-11-2023

Other Information

  • Key: 4872319632
  • DatasetKey: 50c9509d-22c7-4a22-a47d-8c48425ef4a7
  • PublishingOrgKey: 28eb1a3f-1c15-4a95-931a-4af90ecb574d
  • InstallationKey: 997448a8-f762-11e1-a439-00145eb45e9a
  • HostingOrganizationKey: 28eb1a3f-1c15-4a95-931a-4af90ecb574d
  • PublishingCountry: US
  • Protocol: DWC_ARCHIVE
  • LastCrawled: 2024-10-18T20:49:13.203+00:00
  • LastParsed: 2024-10-19T13:26:48.753+00:00
  • CrawlId: 492
  • Extensions:
    • Http://rs.gbif.org/terms/1.0/Multimedia:
      • 0:
        • Http://purl.org/dc/terms/references: https://www.inaturalist.org/photos/362090760
        • Http://purl.org/dc/terms/creator: Anne Parsons
        • Http://purl.org/dc/terms/created: 2024-03-31T09:55:03-07:00
        • Http://rs.tdwg.org/dwc/terms/catalogNumber: 362090760
        • Http://purl.org/dc/terms/rightsHolder: Anne Parsons
        • Http://purl.org/dc/terms/publisher: iNaturalist
        • Http://purl.org/dc/terms/license: http://creativecommons.org/licenses/by-nc/4.0/
        • Http://purl.org/dc/terms/format: image/jpeg
        • Http://purl.org/dc/terms/identifier: https://inaturalist-open-data.s3.amazonaws.com/photos/362090760/original.jpeg
        • Http://purl.org/dc/terms/type: StillImage
      • 1:
        • Http://purl.org/dc/terms/references: https://www.inaturalist.org/photos/362090797
        • Http://purl.org/dc/terms/creator: Anne Parsons
        • Http://purl.org/dc/terms/created: 2024-03-31T09:54:55-07:00
        • Http://rs.tdwg.org/dwc/terms/catalogNumber: 362090797
        • Http://purl.org/dc/terms/rightsHolder: Anne Parsons
        • Http://purl.org/dc/terms/publisher: iNaturalist
        • Http://purl.org/dc/terms/license: http://creativecommons.org/licenses/by-nc/4.0/
        • Http://purl.org/dc/terms/format: image/jpeg
        • Http://purl.org/dc/terms/identifier: https://inaturalist-open-data.s3.amazonaws.com/photos/362090797/original.jpeg
        • Http://purl.org/dc/terms/type: StillImage
  • BasisOfRecord: HUMAN_OBSERVATION
  • OccurrenceStatus: PRESENT
  • TaxonKey: 3223236
  • KingdomKey: 3
  • PhylumKey: 111
  • ClassKey: 362
  • OrderKey: 1474
  • FamilyKey: 5607
  • GenusKey: 3219881
  • SpeciesKey: 3223236
  • AcceptedTaxonKey: 3223236
  • ScientificName: Pseudomonas syringae van Hall, 1902
  • AcceptedScientificName: Pseudomonas syringae van Hall, 1902
  • Kingdom: Bacteria
  • Phylum: Proteobacteria
  • Order: Pseudomonadales
  • Family: Pseudomonadaceae
  • Genus: Pseudomonas
  • Species: Pseudomonas syringae
  • GenericName: Pseudomonas
  • SpecificEpithet: syringae
  • TaxonRank: SPECIES
  • TaxonomicStatus: ACCEPTED
  • IucnRedListCategory: NE
  • DateIdentified: 2024-05-22T15:39:28
  • DecimalLatitude: 37.459545
  • DecimalLongitude: -121.868967
  • Continent: NORTH_AMERICA
  • StateProvince: California
  • Gadm:
    • Level0:
      • Gid: USA
      • Name: United States
    • Level1:
      • Gid: USA.5_1
      • Name: California
    • Level2:
      • Gid: USA.5.43_1
      • Name: Santa Clara
  • Year: 2024
  • Month: 3
  • Day: 31
  • EventDate: 2024-03-31T09:54
  • StartDayOfYear: 91
  • EndDayOfYear: 91
  • Issues:
    • 0: COORDINATE_ROUNDED
    • 1: CONTINENT_DERIVED_FROM_COORDINATES
    • 2: TAXON_MATCH_TAXON_ID_IGNORED
  • Modified: 2024-05-25T02:15:30.000+00:00
  • LastInterpreted: 2024-10-19T13:26:48.753+00:00
  • References: https://www.inaturalist.org/observations/217507486
  • License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
  • IsSequenced: False
  • Identifiers:
    • 0:
      • Identifier: 217507486
  • Media:
    • 0:
      • Type: StillImage
      • Format: image/jpeg
      • References: https://www.inaturalist.org/photos/362090797
      • Created: 2024-03-31T16:54:55.000+00:00
      • Creator: Anne Parsons
      • Publisher: iNaturalist
      • License: http://creativecommons.org/licenses/by-nc/4.0/
      • RightsHolder: Anne Parsons
      • Identifier: https://inaturalist-open-data.s3.amazonaws.com/photos/362090797/original.jpeg
    • 1:
      • Type: StillImage
      • Format: image/jpeg
      • References: https://www.inaturalist.org/photos/362090760
      • Created: 2024-03-31T16:55:03.000+00:00
      • Creator: Anne Parsons
      • Publisher: iNaturalist
      • License: http://creativecommons.org/licenses/by-nc/4.0/
      • RightsHolder: Anne Parsons
      • Identifier: https://inaturalist-open-data.s3.amazonaws.com/photos/362090760/original.jpeg
  • Facts:
  • Relations:
  • IsInCluster: False
  • DatasetName: iNaturalist research-grade observations
  • RecordedBy: Anne Parsons
  • IdentifiedBy: Anne Parsons
  • GeodeticDatum: WGS84
  • Class: Gammaproteobacteria
  • CountryCode: US
  • RecordedByIDs:
  • IdentifiedByIDs:
  • Country: United States of America
  • GbifRegion: NORTH_AMERICA
  • PublishedByGbifRegion: NORTH_AMERICA
  • RightsHolder: Anne Parsons
  • Identifier: 217507486
  • Http://unknown.org/nick: truthseqr
  • VerbatimEventDate: 2024/03/31 9:54 AM
  • VerbatimLocality: Ed R. Levin County Park, CA, USA
  • CollectionCode: Observations
  • GbifID: 4872319632
  • OccurrenceID: https://www.inaturalist.org/observations/217507486
  • TaxonID: 337405
  • CatalogNumber: 217507486
  • InstitutionCode: iNaturalist
  • EventTime: 09:54:00-07:00
  • OccurrenceRemarks: Whitened vetch leaves.
  • Http://unknown.org/captive: wild
  • IdentificationID: 490625032

  • Culture temp:
    • @ref: 67770
    • Growth: positive
    • Type: growth
    • Temperature: 30

  • Isolation:
    • @ref: 67770
    • Sample type: Soil near an oil refinery in Tokyo
    • Country: Japan
    • Origin.country: JPN
    • Continent: Asia

  • 16S sequences:
    • @ref: 67770
    • Description: Pseudomonas sp. DNA for 16S rRNA, partial sequence
    • Accession: D87103
    • Length: 887
    • Database: nuccore
    • NCBI tax ID: 306

  • Lineage: cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; unclassified Pseudomonas
  • LineageEx:
    • Taxon:
      • 0:
        • TaxId: 131567
        • ScientificName: cellular organisms
        • Rank: no rank
      • 1:
        • TaxId: 2
        • ScientificName: Bacteria
        • Rank: superkingdom
      • 2:
        • TaxId: 1224
        • ScientificName: Pseudomonadota
        • Rank: phylum
      • 3:
        • TaxId: 1236
        • ScientificName: Gammaproteobacteria
        • Rank: class
      • 4:
        • TaxId: 72274
        • ScientificName: Pseudomonadales
        • Rank: order
      • 5:
        • TaxId: 135621
        • ScientificName: Pseudomonadaceae
        • Rank: family
      • 6:
        • TaxId: 286
        • ScientificName: Pseudomonas
        • Rank: genus
      • 7:
        • TaxId: 196821
        • ScientificName: unclassified Pseudomonas
        • Rank: no rank