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General Information
Title Escherichia sp. InaCC B1349
Organism Escherichia sp.
Sample Type Microbe
Description
External Links
Description URL
None

Sample Information
Sample Attribute
Sample Name InaCC B1349
Sample Title Escherichia sp. InaCC B1349
Description
Taxonomy ID 1884818
Bioproject Id
Locus Tag Prefix
Strain InaCC B1349
Isolate N/A
Isolation Source N/A
Host N/A
Lab Host
Biomaterial Provider
Sample Type cell culture
Collection Date N/A
Geographic Location Name N/A
Latitude Longitude
Environmental Biome
Depth
Altitude
Collected By
Culture Collection
Genotype
Host Tissue Sampled
Identified By
Mating Type
Passage History
Sample Size
Serotype
Serovar
Specimen Voucher
Temperature
Organism 1018
Center PUSAT RISET KOMPUTASI
Lab Pusat Sekuensing
Submitter Inna Syafarina
Submitted at 16-11-2023
Published at 16-11-2023

Other Information

  • Key: 4851900803
  • DatasetKey: 50c9509d-22c7-4a22-a47d-8c48425ef4a7
  • PublishingOrgKey: 28eb1a3f-1c15-4a95-931a-4af90ecb574d
  • InstallationKey: 997448a8-f762-11e1-a439-00145eb45e9a
  • HostingOrganizationKey: 28eb1a3f-1c15-4a95-931a-4af90ecb574d
  • PublishingCountry: US
  • Protocol: DWC_ARCHIVE
  • LastCrawled: 2024-10-18T20:49:13.203+00:00
  • LastParsed: 2024-10-19T13:50:26.596+00:00
  • CrawlId: 492
  • Extensions:
    • Http://rs.gbif.org/terms/1.0/Multimedia:
      • 0:
        • Http://purl.org/dc/terms/references: https://www.inaturalist.org/photos/368063408
        • Http://purl.org/dc/terms/creator: El Vaquero Loco
        • Http://purl.org/dc/terms/created: 2024-04-18T21:22:56-07:00
        • Http://rs.tdwg.org/dwc/terms/catalogNumber: 368063408
        • Http://purl.org/dc/terms/rightsHolder: El Vaquero Loco
        • Http://purl.org/dc/terms/publisher: iNaturalist
        • Http://purl.org/dc/terms/license: http://creativecommons.org/licenses/by-nc/4.0/
        • Http://purl.org/dc/terms/format: image/jpeg
        • Http://purl.org/dc/terms/identifier: https://inaturalist-open-data.s3.amazonaws.com/photos/368063408/original.jpeg
        • Http://purl.org/dc/terms/type: StillImage
  • BasisOfRecord: HUMAN_OBSERVATION
  • OccurrenceStatus: PRESENT
  • TaxonKey: 3221780
  • KingdomKey: 3
  • PhylumKey: 111
  • ClassKey: 362
  • OrderKey: 10801383
  • FamilyKey: 4899
  • GenusKey: 3221780
  • AcceptedTaxonKey: 3221780
  • ScientificName: Escherichia Castellani & Chalmers, 1919
  • AcceptedScientificName: Escherichia Castellani & Chalmers, 1919
  • Kingdom: Bacteria
  • Phylum: Proteobacteria
  • Order: Enterobacterales
  • Family: Enterobacteriaceae
  • Genus: Escherichia
  • GenericName: Escherichia
  • TaxonRank: GENUS
  • TaxonomicStatus: ACCEPTED
  • DateIdentified: 2024-04-19T04:30:44
  • DecimalLatitude: 47.713074
  • DecimalLongitude: -122.166239
  • CoordinateUncertaintyInMeters: 26807.0
  • Continent: NORTH_AMERICA
  • StateProvince: Washington
  • Gadm:
    • Level0:
      • Gid: USA
      • Name: United States
    • Level1:
      • Gid: USA.48_1
      • Name: Washington
    • Level2:
      • Gid: USA.48.17_1
      • Name: King
  • Year: 2024
  • Month: 4
  • Day: 18
  • EventDate: 2024-04-18T21:22:56
  • StartDayOfYear: 109
  • EndDayOfYear: 109
  • Issues:
    • 0: COORDINATE_ROUNDED
    • 1: CONTINENT_DERIVED_FROM_COORDINATES
    • 2: TAXON_MATCH_TAXON_ID_IGNORED
  • Modified: 2024-04-22T18:48:28.000+00:00
  • LastInterpreted: 2024-10-19T13:50:26.596+00:00
  • References: https://www.inaturalist.org/observations/208046133
  • License: http://creativecommons.org/licenses/by-nc/4.0/legalcode
  • IsSequenced: False
  • Identifiers:
    • 0:
      • Identifier: 208046133
  • Media:
    • 0:
      • Type: StillImage
      • Format: image/jpeg
      • References: https://www.inaturalist.org/photos/368063408
      • Created: 2024-04-19T04:22:56.000+00:00
      • Creator: El Vaquero Loco
      • Publisher: iNaturalist
      • License: http://creativecommons.org/licenses/by-nc/4.0/
      • RightsHolder: El Vaquero Loco
      • Identifier: https://inaturalist-open-data.s3.amazonaws.com/photos/368063408/original.jpeg
  • Facts:
  • Relations:
  • IsInCluster: False
  • DatasetName: iNaturalist research-grade observations
  • RecordedBy: El Vaquero Loco
  • IdentifiedBy: El Vaquero Loco
  • GeodeticDatum: WGS84
  • Class: Gammaproteobacteria
  • CountryCode: US
  • RecordedByIDs:
  • IdentifiedByIDs:
  • Country: United States of America
  • GbifRegion: NORTH_AMERICA
  • PublishedByGbifRegion: NORTH_AMERICA
  • RightsHolder: El Vaquero Loco
  • Identifier: 208046133
  • Http://unknown.org/nick: vaqueroloco
  • InformationWithheld: Coordinate uncertainty increased to 26807m at the request of the observer
  • VerbatimEventDate: 2024-04-18 21:22:56
  • VerbatimLocality: Washington, US
  • CollectionCode: Observations
  • GbifID: 4851900803
  • OccurrenceID: https://www.inaturalist.org/observations/208046133
  • TaxonID: 450838
  • CatalogNumber: 208046133
  • InstitutionCode: iNaturalist
  • EventTime: 21:22:56-07:00
  • OccurrenceRemarks: 4th, stomach microbiome not doing good lately
  • Http://unknown.org/captive: wild
  • IdentificationID: 472635217

  • Culture medium:
    • @ref: 67265
    • Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
    • Growth: yes
    • Link: https://mediadive.dsmz.de/medium/92
    • Composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
  • Culture temp:
    • @ref: 67265
    • Growth: positive
    • Type: growth
    • Temperature: 37

  • Isolation:
    • @ref: 67265
    • Sample type: chicken cecal content, adult
    • Geographic location: Munich
    • Country: Germany
    • Origin.country: DEU
    • Continent: Europe
    • Latitude: 48.1502
    • Longitude: 11.5857

  • 16S sequences:
    • @ref: 67265
    • Description: Escherichia sp. strain ClaCZ1 16S ribosomal RNA gene, partial sequence
    • Accession: MN055927.1
    • Length: 1480
    • Database: nuccore
    • NCBI tax ID: 1884818
  • Genome sequences:
    • 0:
      • @ref: 66792
      • Description: Escherichia sp. DSM 109009
      • Accession: GCA_014982845
      • Assembly level: contig
      • Database: ncbi
      • NCBI tax ID: 2779353
    • 1:
      • @ref: 66792
      • Description: Escherichia sp. DSM 109009
      • Accession: 2779353.3
      • Assembly level: wgs
      • Database: patric
      • NCBI tax ID: 2779353

  • Lineage: cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; unclassified Escherichia
  • LineageEx:
    • Taxon:
      • 0:
        • TaxId: 131567
        • ScientificName: cellular organisms
        • Rank: no rank
      • 1:
        • TaxId: 2
        • ScientificName: Bacteria
        • Rank: superkingdom
      • 2:
        • TaxId: 1224
        • ScientificName: Pseudomonadota
        • Rank: phylum
      • 3:
        • TaxId: 1236
        • ScientificName: Gammaproteobacteria
        • Rank: class
      • 4:
        • TaxId: 91347
        • ScientificName: Enterobacterales
        • Rank: order
      • 5:
        • TaxId: 543
        • ScientificName: Enterobacteriaceae
        • Rank: family
      • 6:
        • TaxId: 561
        • ScientificName: Escherichia
        • Rank: genus
      • 7:
        • TaxId: 2608889
        • ScientificName: unclassified Escherichia
        • Rank: no rank