General Information

Title Stenotrophomonas sp. InaCC B1346
Organism Stenotrophomonas sp.
Sample Type Microbe
Description
External Links
Description URL
None

Sample Information

Sample Attribute
Sample Name InaCC B1346
Sample Title Stenotrophomonas sp. InaCC B1346
Description
Taxonomy ID 69392
Bioproject Id
Locus Tag Prefix
Strain InaCC B1346
Isolate N/A
Isolation Source N/A
Host N/A
Lab Host
Biomaterial Provider
Sample Type cell culture
Collection Date N/A
Geographic Location Name N/A
Latitude Longitude
Environmental Biome
Depth
Altitude
Collected By
Culture Collection
Genotype
Host Tissue Sampled
Identified By
Mating Type
Passage History
Sample Size
Serotype
Serovar
Specimen Voucher
Temperature
Organism 1019
Center PUSAT RISET KOMPUTASI
Lab Pusat Sekuensing
Submitter Inna Syafarina
Submitted at 16-11-2023
Published at 16-11-2023

Other Information

  • Key: 4846718339
  • DatasetKey: 3c6e7390-3b56-11dc-8c19-b8a03c50a862
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  • PublishingCountry: NZ
  • Protocol: EML
  • LastCrawled: 2024-10-20T12:01:29.559+00:00
  • LastParsed: 2024-10-20T12:02:21.316+00:00
  • CrawlId: 657
  • Extensions:
    • Http://rs.tdwg.org/ac/terms/Multimedia:
      • 0:
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        • Http://purl.org/dc/terms/creator: Diana Lee
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        • Http://rs.tdwg.org/ac/terms/associatedSpecimenReference: ICMP 25385
        • Http://purl.org/dc/terms/available: 2024-04-15T09:11:21.5832991+12:00
        • Http://rs.tdwg.org/ac/terms/provider: Landcare Research
        • Http://ns.adobe.com/xap/1.0/rights/WebStatement: http://creativecommons.org/licenses/by/4.0/
        • Http://purl.org/dc/terms/title: ICMP 25385 on YNA
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    • Http://rs.tdwg.org/dwc/terms/Identification:
      • 0:
        • Http://rs.tdwg.org/dwc/terms/genus: Coffea
        • Http://rs.tdwg.org/dwc/terms/scientificName: Coffea arabica
        • Http://rs.tdwg.org/dwc/terms/class: Magnoliopsida
        • Http://rs.tdwg.org/dwc/terms/family: Rubiaceae
        • Http://rs.tdwg.org/dwc/terms/taxonRank: species
        • Http://rs.tdwg.org/dwc/terms/phylum: Tracheophyta
        • Http://rs.tdwg.org/dwc/terms/specificEpithet: arabica
        • Http://rs.tdwg.org/dwc/terms/order: Gentianales
        • Http://rs.tdwg.org/dwc/terms/kingdom: HostList
        • Http://rs.tdwg.org/dwc/terms/identificationID: 66268
      • 1:
        • Http://rs.tdwg.org/dwc/terms/scientificName: Bacteria
        • Http://rs.tdwg.org/dwc/terms/identificationRemarks: Morphology
        • Http://rs.tdwg.org/dwc/terms/identifiedBy: Cathryn Todd
        • Http://rs.tdwg.org/dwc/terms/taxonRank: kingdom
        • Http://rs.tdwg.org/dwc/terms/kingdom: Bacteria
        • Http://rs.tdwg.org/dwc/terms/identificationID: 66269
      • 2:
        • Http://rs.tdwg.org/dwc/terms/genus: Stenotrophomonas
        • Http://rs.tdwg.org/dwc/terms/scientificName: Stenotrophomonas Palleroni & Bradbury
        • Http://rs.tdwg.org/dwc/terms/identificationRemarks: Closest to S. maltophilia (ICMP 2820 aka Pseudonomonas beteli) via 16s, need more genes to confirm
        • Http://rs.tdwg.org/dwc/terms/class: Gammaproteobacteria
        • Http://rs.tdwg.org/dwc/terms/family: Lysobacteraceae
        • Http://rs.tdwg.org/dwc/terms/identifiedBy: D. Lee
        • Http://rs.tdwg.org/dwc/terms/taxonRank: genus
        • Http://rs.tdwg.org/dwc/terms/dateIdentified: 2024-05-06
        • Http://rs.tdwg.org/dwc/terms/phylum: Pseudomonadota
        • Http://rs.tdwg.org/dwc/terms/order: Lysobacterales
        • Http://rs.tdwg.org/dwc/terms/kingdom: Bacteria
        • Http://rs.tdwg.org/dwc/terms/identificationID: 66484
  • BasisOfRecord: LIVING_SPECIMEN
  • OccurrenceStatus: PRESENT
  • TaxonKey: 3222368
  • KingdomKey: 3
  • PhylumKey: 111
  • ClassKey: 362
  • OrderKey: 820
  • FamilyKey: 5611
  • GenusKey: 3222368
  • AcceptedTaxonKey: 3222368
  • ScientificName: Stenotrophomonas Palleroni & Bradbury, 1993
  • AcceptedScientificName: Stenotrophomonas Palleroni & Bradbury, 1993
  • Kingdom: Bacteria
  • Phylum: Proteobacteria
  • Order: Xanthomonadales
  • Family: Xanthomonadaceae
  • Genus: Stenotrophomonas
  • GenericName: Stenotrophomonas
  • TaxonRank: GENUS
  • TaxonomicStatus: ACCEPTED
  • DateIdentified: 2024-05-06T00:00:00
  • DecimalLatitude: 15.191
  • DecimalLongitude: 106.18
  • Continent: ASIA
  • Gadm:
    • Level0:
      • Gid: LAO
      • Name: Laos
    • Level1:
      • Gid: LAO.4_1
      • Name: Champasak
    • Level2:
      • Gid: LAO.4.5_1
      • Name: Paksong
  • Year: 2024
  • Month: 2
  • Day: 9
  • EventDate: 2024-02-09
  • StartDayOfYear: 40
  • EndDayOfYear: 40
  • Issues:
    • 0: CONTINENT_DERIVED_FROM_COORDINATES
    • 1: INSTITUTION_MATCH_FUZZY
    • 2: INSTITUTION_COLLECTION_MISMATCH
  • Modified: 2024-09-18T16:41:25.913+00:00
  • LastInterpreted: 2024-10-20T12:02:21.316+00:00
  • References: https://scd.landcareresearch.co.nz/Specimen/ICMP_25385
  • License: http://creativecommons.org/licenses/by/4.0/legalcode
  • IsSequenced: False
  • Identifiers:
    • 0:
      • Identifier: 07DE683E-C86A-442E-8870-3C0C321551F0
  • Media:
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      • Type: StillImage
      • Format: text/html
      • Title: ICMP 25385 on YNA
      • Creator: Diana Lee
      • License: Landcare Research
      • Identifier: http://data.landcareresearch.co.nz/Image/4WB6/NZVH
  • Facts:
  • Relations:
  • InstitutionKey: 22ff6145-71a0-4829-b099-bdbcccc9adba
  • IsInCluster: False
  • RecordedBy: Cathryn Todd
  • IdentifiedBy: D. Lee
  • GeodeticDatum: WGS84
  • Class: Gammaproteobacteria
  • CountryCode: LA
  • RecordedByIDs:
  • IdentifiedByIDs:
  • Country: Lao People’s Democratic Republic
  • GbifRegion: ASIA
  • PublishedByGbifRegion: OCEANIA
  • RightsHolder: Manaaki Whenua - Landcare Research NZ Ltd.
  • Identifier: 07DE683E-C86A-442E-8870-3C0C321551F0
  • CatalogNumber: ICMP 25385
  • VerbatimEventDate: 9 Feb 2024
  • InstitutionCode: ICMP
  • IdentificationRemarks: Closest to S. maltophilia (ICMP 2820 aka Pseudonomonas beteli) via 16s, need more genes to confirm
  • CollectionCode: ICMP
  • VerbatimLocality: Paksong City, Champasak Province
  • GbifID: 4846718339
  • OccurrenceID: 07DE683E-C86A-442E-8870-3C0C321551F0
  • IdentificationID: 66484

  • Lineage: cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Stenotrophomonas; unclassified Stenotrophomonas
  • LineageEx:
    • Taxon:
      • 0:
        • TaxId: 131567
        • ScientificName: cellular organisms
        • Rank: no rank
      • 1:
        • TaxId: 2
        • ScientificName: Bacteria
        • Rank: superkingdom
      • 2:
        • TaxId: 1224
        • ScientificName: Pseudomonadota
        • Rank: phylum
      • 3:
        • TaxId: 1236
        • ScientificName: Gammaproteobacteria
        • Rank: class
      • 4:
        • TaxId: 135614
        • ScientificName: Lysobacterales
        • Rank: order
      • 5:
        • TaxId: 32033
        • ScientificName: Lysobacteraceae
        • Rank: family
      • 6:
        • TaxId: 40323
        • ScientificName: Stenotrophomonas
        • Rank: genus
      • 7:
        • TaxId: 196198
        • ScientificName: unclassified Stenotrophomonas
        • Rank: no rank